RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 FAF2Q96CS3 445 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 TBC1D31Q96DN5 1066 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 CCDC114Q96M63 670 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 CSPG4P5Q96PW8 444 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 KRT12Q99456 494 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 FERMT1Q9BQL6 677 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 NUP210Q8TEM1 1887 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-207ENST00000539047 RFXAPO00287 272 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 LATS1O95835 1130 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 GAS8O95995 478 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 IRF1P10914 325 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 GOT1P17174 413 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 AVPR1AP37288 418 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 NRG1Q02297 640 aaPredicted RBP15.93■□□□□ 0.14
VAMP1-207ENST00000539047 KLF1Q13351 362 aaPredicted RBP15.93■□□□□ 0.14
VAMP1-207ENST00000539047 DHX34Q14147 1143 aaKnown RBP15.93■□□□□ 0.14
VAMP1-207ENST00000539047 CCNG2Q16589 344 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 GPR158Q5T848 1215 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 RWDD4Q6NW29 188 aaKnown RBP15.93■□□□□ 0.14
VAMP1-207ENST00000539047 TMCO3Q6UWJ1 677 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 GAREM2Q75VX8 874 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 TMEM150AQ86TG1 271 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 CHSY1Q86X52 802 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 CCDC105Q8IYK2 499 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 PYROXD2Q8N2H3 581 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 EFHBQ8N7U6 833 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 MAB21L3Q8N8X9 362 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 TSC1Q92574 1164 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 HAUS1Q96CS2 278 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 C1orf74Q96LT6 269 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 FAM161BQ96MY7 647 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 LRRC3Q9BY71 257 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 HCFC1R1Q9NWW0 138 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 CWC15Q9P013 229 aaKnown RBP15.93■□□□□ 0.14
VAMP1-207ENST00000539047 SH3BP1Q9Y3L3 701 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 C2orf16Q68DN1 1984 aa15.93■□□□□ 0.14
VAMP1-207ENST00000539047 TYW5A2RUC4 315 aaKnown RBP15.92■□□□□ 0.14
VAMP1-207ENST00000539047 F5H5T6 163 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 OLFM2O95897 454 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 MCM3P25205 808 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 EPHB2P29323 1055 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 NR2C2P49116 596 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 DR1Q01658 176 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 CYP1B1Q16678 543 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 TCEAL5Q5H9L2 206 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 RABGAP1LQ5R372 815 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 TXNDC8Q6A555 127 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 SLC9A4Q6AI14 798 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 CCDC137Q6PK04 289 aaKnown RBP15.92■□□□□ 0.14
VAMP1-207ENST00000539047 GRASPQ7Z6J2 395 aaPredicted RBP15.92■□□□□ 0.14
VAMP1-207ENST00000539047 ARL14EPQ8N8R7 260 aaPredicted RBP15.92■□□□□ 0.14
VAMP1-207ENST00000539047 PRELID2Q8N945 189 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 DDX47Q9H0S4 455 aaKnown RBP15.92■□□□□ 0.14
VAMP1-207ENST00000539047 TASP1Q9H6P5 420 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 LRRC19Q9H756 370 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 ARHGEF4Q9NR80 690 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 TMPRSS4Q9NRS4 437 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 SMPD4Q9NXE4 827 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 DNMT3BQ9UBC3 853 aaKnown RBP15.92■□□□□ 0.14
VAMP1-207ENST00000539047 ZNF510Q9Y2H8 683 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 MRPS23Q9Y3D9 190 aaKnown RBP15.92■□□□□ 0.14
VAMP1-207ENST00000539047 RAD54BQ9Y620 910 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 CPQQ9Y646 472 aa15.92■□□□□ 0.14
VAMP1-207ENST00000539047 UQCRHLA0A096LP55 91 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 TCRBV7S2A1N4TA0A589 114 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 ACSL4O60488 711 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 LRIG2O94898 1065 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 ECEL1O95672 775 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 UQCRHP07919 91 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 HOXB8P17481 243 aaPredicted RBP15.91■□□□□ 0.14
VAMP1-207ENST00000539047 CORO1AP31146 461 aaKnown RBP15.91■□□□□ 0.14
VAMP1-207ENST00000539047 SLC7A9P82251 487 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 OTUD4Q01804 1114 aaKnown RBP15.91■□□□□ 0.14
VAMP1-207ENST00000539047 SEMA3BQ13214 749 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 DPYSQ14117 519 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 RARS2Q5T160 578 aaKnown RBP15.91■□□□□ 0.14
VAMP1-207ENST00000539047 C1orf228Q6PIY5 440 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 TMC5Q6UXY8 1006 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 GSTA5Q7RTV2 222 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 NOA1Q8NC60 698 aaKnown RBP15.91■□□□□ 0.14
VAMP1-207ENST00000539047 PCDH19Q8TAB3 1148 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 SHKBP1Q8TBC3 707 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 C1orf54Q8WWF1 131 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 RUBCNQ92622 972 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 AZIN2Q96A70 460 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 KLF16Q9BXK1 252 aaPredicted RBP15.91■□□□□ 0.14
VAMP1-207ENST00000539047 RAB17Q9H0T7 212 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 HEY1Q9Y5J3 304 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 HS3ST4Q9Y661 456 aa15.91■□□□□ 0.14
VAMP1-207ENST00000539047 DOCK4Q8N1I0 1966 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 FAM187AA6NFU0 413 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 E9PAM4 449 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 PPP1R12AO14974 1030 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 LIASO43766 372 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 STC2O76061 302 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 TUBBP07437 444 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 RHOXF2BP0C7M4 288 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 AMPD1P23109 780 aa15.9■□□□□ 0.14
VAMP1-207ENST00000539047 COILP38432 576 aaPredicted RBP15.9■□□□□ 0.14
VAMP1-207ENST00000539047 MLLT6P55198 1093 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms