RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 SLC2A13Q96QE2 648 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 LSM14BQ9BX40 385 aaKnown RBP12.01□□□□□ -0.49
RTN3-209ENST00000538995 STK33Q9BYT3 514 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 TAB2Q9NYJ8 693 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 CALCOCO1Q9P1Z2 691 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 CLEC4EQ9ULY5 219 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 STON1Q9Y6Q2 735 aa12.01□□□□□ -0.49
RTN3-209ENST00000538995 EML5Q05BV3 1969 aa12□□□□□ -0.49
RTN3-209ENST00000538995 F8VZ95 297 aa12□□□□□ -0.49
RTN3-209ENST00000538995 SLC30A4O14863 429 aa12□□□□□ -0.49
RTN3-209ENST00000538995 LSM8O95777 96 aaKnown RBP12□□□□□ -0.49
RTN3-209ENST00000538995 CAVIN2O95810 425 aa12□□□□□ -0.49
RTN3-209ENST00000538995 TRUB2O95900 331 aaKnown RBP12□□□□□ -0.49
RTN3-209ENST00000538995 PNMA6AP0CW24 399 aaPredicted RBP12□□□□□ -0.49
RTN3-209ENST00000538995 PABPC1P11940 636 aaKnown RBP12□□□□□ -0.49
RTN3-209ENST00000538995 CYP11B1P15538 503 aa12□□□□□ -0.49
RTN3-209ENST00000538995 SLC6A4P31645 630 aa12□□□□□ -0.49
RTN3-209ENST00000538995 HOXD12P35452 270 aa12□□□□□ -0.49
RTN3-209ENST00000538995 SCNN1AP37088 669 aa12□□□□□ -0.49
RTN3-209ENST00000538995 IL12RB1P42701 662 aa12□□□□□ -0.49
RTN3-209ENST00000538995 CDK17Q00537 523 aa12□□□□□ -0.49
RTN3-209ENST00000538995 CREB5Q02930 508 aa12□□□□□ -0.49
RTN3-209ENST00000538995 ARID5AQ03989 594 aa12□□□□□ -0.49
RTN3-209ENST00000538995 EIF4EBP2Q13542 120 aaPredicted RBP12□□□□□ -0.49
RTN3-209ENST00000538995 ZNF234Q14588 700 aa12□□□□□ -0.49
RTN3-209ENST00000538995 KRT31Q15323 416 aa12□□□□□ -0.49
RTN3-209ENST00000538995 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
RTN3-209ENST00000538995 AASDHQ4L235 1098 aaPredicted RBP12□□□□□ -0.49
RTN3-209ENST00000538995 FKBP15Q5T1M5 1219 aa12□□□□□ -0.49
RTN3-209ENST00000538995 SYPL2Q5VXT5 272 aa12□□□□□ -0.49
RTN3-209ENST00000538995 NADSYN1Q6IA69 706 aa12□□□□□ -0.49
RTN3-209ENST00000538995 KIAA1211LQ6NV74 962 aa12□□□□□ -0.49
RTN3-209ENST00000538995 RFWD3Q6PCD5 774 aa12□□□□□ -0.49
RTN3-209ENST00000538995 SLC26A9Q7LBE3 791 aa12□□□□□ -0.49
RTN3-209ENST00000538995 CYP2U1Q7Z449 544 aa12□□□□□ -0.49
RTN3-209ENST00000538995 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
RTN3-209ENST00000538995 TMEM35BQ8NCS4 154 aa12□□□□□ -0.49
RTN3-209ENST00000538995 ANKRD20A12PQ8NF67 263 aa12□□□□□ -0.49
RTN3-209ENST00000538995 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
RTN3-209ENST00000538995 RLN3Q8WXF3 142 aa12□□□□□ -0.49
RTN3-209ENST00000538995 BTN2A3PQ96KV6 586 aa12□□□□□ -0.49
RTN3-209ENST00000538995 MRGPRX1Q96LB2 322 aa12□□□□□ -0.49
RTN3-209ENST00000538995 PRICKLE1Q96MT3 831 aaPredicted RBP12□□□□□ -0.49
RTN3-209ENST00000538995 CIPCQ9C0C6 399 aa12□□□□□ -0.49
RTN3-209ENST00000538995 SYNCQ9H7C4 482 aa12□□□□□ -0.49
RTN3-209ENST00000538995 ABCB8Q9NUT2 735 aa12□□□□□ -0.49
RTN3-209ENST00000538995 TMEM51Q9NW97 253 aa12□□□□□ -0.49
RTN3-209ENST00000538995 TJP2Q9UDY2 1190 aa12□□□□□ -0.49
RTN3-209ENST00000538995 GGA2Q9UJY4 613 aa12□□□□□ -0.49
RTN3-209ENST00000538995 INVSQ9Y283 1065 aa12□□□□□ -0.49
RTN3-209ENST00000538995 SDK1Q7Z5N4 2213 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 MAP3K13O43283 966 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 AP5Z1O43299 807 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 SYNCRIPO60506 623 aaKnown RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 TBL1XO60907 577 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 DAB1O75553 588 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 ERBB2P04626 1255 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 ATP5BP06576 529 aaKnown RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 SGSHP51688 502 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 ATXN1P54253 815 aaKnown RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 SF3A2Q15428 464 aaKnown RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 FUT11Q495W5 492 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 DCAF6Q58WW2 860 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 MS4A13Q5J8X5 152 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 TMEM215Q68D42 235 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 SERPINA13PQ6UXR4 307 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 FAM183BPQ6ZVS7 135 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 CHST9Q7L1S5 443 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 MFN1Q8IWA4 741 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 CCDC117Q8IWD4 279 aaPredicted RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 MSANTD4Q8NCY6 345 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 FIBINQ8TAL6 211 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 ADAM32Q8TC27 787 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 NUCKS1Q9H1E3 243 aaKnown RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 GANQ9H2C0 597 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 FAM204AQ9H8W3 233 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 FBRSQ9HAH7 460 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 FANCLQ9NW38 375 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.99□□□□□ -0.49
RTN3-209ENST00000538995 RRN3Q9NYV6 651 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 SLC12A6Q9UHW9 1150 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 MBD1Q9UIS9 605 aaPredicted RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 RAD54BQ9Y620 910 aa11.99□□□□□ -0.49
RTN3-209ENST00000538995 MYO18AQ92614 2054 aaKnown RBP11.99□□□□□ -0.49
RTN3-209ENST00000538995 NCOR2Q9Y618 2525 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 PLXND1Q9Y4D7 1925 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 IGHV1OR15-9A0A0B4J2B8 117 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 GOLGA6L7A0A1B0GV03 622 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 LGALS16A8MUM7 142 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 WASH3PC4AMC7 463 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 MOCS2O96007 188 aaPredicted RBP11.98□□□□□ -0.49
RTN3-209ENST00000538995 DLDP09622 509 aaKnown RBP11.98□□□□□ -0.49
RTN3-209ENST00000538995 C7P10643 843 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 ZNF18P17022 549 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 ABCB4P21439 1286 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 CCR1P32246 355 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 GABRB2P47870 512 aa11.98□□□□□ -0.49
RTN3-209ENST00000538995 DHPSP49366 369 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms