RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 MCF2LO15068 1137 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 FGF10O15520 208 aaPredicted RBP12.76□□□□□ -0.37
DDB1-209ENST00000537877 DAPK3O43293 454 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 RFPL2O75678 378 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 LRIG2O94898 1065 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 ECEL1O95672 775 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 MOCS2O96007 188 aaPredicted RBP12.76□□□□□ -0.37
DDB1-209ENST00000537877 MYL4P12829 197 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 MCM3P25205 808 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.37
DDB1-209ENST00000537877 NRIP1P48552 1158 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 NR2C2P49116 596 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 VCPP55072 806 aaKnown RBP12.76□□□□□ -0.37
DDB1-209ENST00000537877 DR1Q01658 176 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 NCBP2-AS2Q69YL0 99 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 TTC27Q6P3X3 843 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
DDB1-209ENST00000537877 GAREM2Q75VX8 874 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 BZW1Q7L1Q6 419 aaKnown RBP12.76□□□□□ -0.37
DDB1-209ENST00000537877 RBM23Q86U06 439 aaKnown RBP12.76□□□□□ -0.37
DDB1-209ENST00000537877 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 ATL2Q8NHH9 583 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 SLC35B2Q8TB61 432 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 ACTL9Q8TC94 416 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 P3H4Q92791 437 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 AZIN2Q96A70 460 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 HAUS1Q96CS2 278 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 TBC1D31Q96DN5 1066 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 MAGEB5Q9BZ81 275 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 PRKD2Q9BZL6 878 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 ANKZF1Q9H8Y5 726 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 TRPC7Q9HCX4 862 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 DZANK1Q9NVP4 752 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 STIM2Q9P246 746 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 ZMYM5Q9UJ78 669 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 RAD54BQ9Y620 910 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 HS3ST4Q9Y661 456 aa12.76□□□□□ -0.37
DDB1-209ENST00000537877 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 DCLK1O15075 740 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 TTI1O43156 1089 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 ZNF189O75820 626 aaPredicted RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 HEXIM1O94992 359 aaKnown RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 LATS1O95835 1130 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 GAS8O95995 478 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 MBL2P11226 248 aaPredicted RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 PECAM1P16284 738 aaPredicted RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 AMPD1P23109 780 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 SERPINB6P35237 376 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 HARS2P49590 506 aaKnown RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 MLLT6P55198 1093 aaPredicted RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 CYP4F8P98187 520 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 KCNC3Q14003 757 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 NAA30Q147X3 362 aaPredicted RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 PAFAH1B3Q15102 231 aaKnown RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 OASLQ15646 514 aaKnown RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 MS4A13Q5J8X5 152 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 PIK3R6Q5UE93 754 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 PDZD4Q76G19 769 aaPredicted RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 JAMLQ86YT9 394 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 CCDC114Q96M63 670 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 KLF16Q9BXK1 252 aaPredicted RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 SIK2Q9H0K1 926 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 RAB17Q9H0T7 212 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 ATXN3LQ9H3M9 355 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 CATSPERBQ9H7T0 1116 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 DNPEPQ9ULA0 475 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 NEU3Q9UQ49 428 aa12.75□□□□□ -0.37
DDB1-209ENST00000537877 DRG1Q9Y295 367 aaKnown RBP12.75□□□□□ -0.37
DDB1-209ENST00000537877 HELZP42694 1942 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 TMEM265A0A087WTH1 108 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 TRAV19A0A0A6YYK7 116 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 A0A1W2PRU2 124 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 CFAP69A5D8W1 941 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 E9PAM4 449 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 ZNF197O14709 1029 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 ACSL4O60488 711 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 STC2O76061 302 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 ITGAVP06756 1048 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 RHOP08100 348 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 HMBSP08397 361 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 ERCC2P18074 760 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 EPHB2P29323 1055 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 PTGIRP43119 386 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 SLC11A2P49281 568 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 KCNQ1P51787 676 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
DDB1-209ENST00000537877 SLC7A9P82251 487 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 XRCC4Q13426 336 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 SNX1Q13596 522 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 TXNDC8Q6A555 127 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 WDR93Q6P2C0 686 aa12.74□□□□□ -0.37
DDB1-209ENST00000537877 TMCO3Q6UWJ1 677 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms