RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 KCTD19Q17RG1 926 aaPredicted RBP16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 ARL13BQ3SXY8 428 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 ARHGAP15Q53QZ3 475 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 MS4A13Q5J8X5 152 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 HABP4Q5JVS0 413 aaKnown RBP16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 SEL1L2Q5TEA6 688 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 NPAS3Q8IXF0 933 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 USP13Q92995 863 aaPredicted RBP16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 MSLNLQ96KJ4 702 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 OSBPL8Q9BZF1 889 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 ADAM7Q9H2U9 754 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 CFAP97Q9P2B7 532 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 OR12D3Q9UGF7 316 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 NEU3Q9UQ49 428 aa16.21■□□□□ 0.18
SFSWAP-206ENST00000537582 CLUHO75153 1309 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 H3BQ06 376 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 ZNF197O14709 1029 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 TRDMT1O14717 391 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 HOXB8P17481 243 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 SLC6A4P31645 630 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 DYNLT1P63172 113 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 COG7P83436 770 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 ODF2Q5BJF6 829 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 RAP1GAP2Q684P5 730 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 SLC13A5Q86YT5 568 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 NETO2Q8NC67 525 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 PCDH19Q8TAB3 1148 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 PPM1EQ8WY54 764 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 PLD4Q96BZ4 506 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 PABPC5Q96DU9 382 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 CSPG4P5Q96PW8 444 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 FAM118BQ9BPY3 351 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 AP1M1Q9BXS5 423 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 ETNK2Q9NVF9 386 aa16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 AGO1Q9UL18 857 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-206ENST00000537582 LEFTY2O00292 366 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 CES2O00748 559 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 LRIG2O94898 1065 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 SLC2A3P11169 496 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 AMPD1P23109 780 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 AVPR1AP37288 418 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 KPNA1P52294 538 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 AIF1P55008 147 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 VCPP55072 806 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 PDK2Q15119 407 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 LONRF2Q1L5Z9 754 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 FAM133BQ5BKY9 247 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 ANKRD20A8PQ5CZ79 823 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 TFDP3Q5H9I0 405 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 RFWD3Q6PCD5 774 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 PSTKQ8IV42 348 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 ZNF683Q8IZ20 524 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 DEFB123Q8N688 67 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 PQLC3Q8N755 202 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 ZSCAN18Q8TBC5 510 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 ACTRT1Q8TDG2 376 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 SH3RF2Q8TEC5 729 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 FGF13Q92913 245 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 HAUS1Q96CS2 278 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 BTN2A3PQ96KV6 586 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 HAPLN3Q96S86 360 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 L2HGDHQ9H9P8 463 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 SAE1Q9UBE0 346 aaPredicted RBP16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 VANGL2Q9ULK5 521 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 ARHGAP26Q9UNA1 814 aa16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 R3HDM2Q9Y2K5 976 aaKnown RBP16.19■□□□□ 0.18
SFSWAP-206ENST00000537582 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 PGRMC1O00264 195 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 DDX6P26196 483 aaKnown RBP eCLIP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 HARS2P49590 506 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 MLLT6P55198 1093 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 AUHQ13825 339 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 SIX1Q15475 284 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 CCDC181Q5TID7 509 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 MANEALQ5VSG8 457 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 NPNTQ6UXI9 565 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 RFX8Q6ZV50 586 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 CIR1Q86X95 450 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 RFX6Q8HWS3 928 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 ARID3BQ8IVW6 561 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 ATP6V0D2Q8N8Y2 350 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 FAF2Q96CS3 445 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 P2RY11Q96G91 374 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 LRRC3BQ96PB8 259 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 RNF157Q96PX1 679 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 PRMT1Q99873 361 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 ZNF670Q9BS34 389 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 CARD6Q9BX69 1037 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 OSBPL2Q9H1P3 480 aa16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 SPTBN5Q9NRC6 3674 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-206ENST00000537582 E9PAM4 449 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 EEF2KO00418 725 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 ACSL4O60488 711 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 VIPR2P41587 438 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 SGSHP51688 502 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 ITIH3Q06033 890 aa16.17■□□□□ 0.18
SFSWAP-206ENST00000537582 KLF1Q13351 362 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms