RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TMA16Q96EY4 203 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NUP58Q9BVL2 599 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 STK33Q9BYT3 514 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SLC2A11Q9BYW1 496 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ARRDC1-AS1Q9H2J1 176 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NLRC4Q9NPP4 1024 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CACNA2D2Q9NY47 1150 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TLR6Q9Y2C9 796 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SPTBN2O15020 2390 aa18.57■□□□□ 0.56
TNFRSF1A-209ENST00000536717 GOLGA6L7A0A1B0GV03 622 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 WASH3PC4AMC7 463 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CAPN9O14815 690 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 EPHB6O15197 1021 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 AP5Z1O43299 807 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 IGLV3-25P01717 112 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 GABRG2P18507 467 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 KRT9P35527 623 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 YWHAZP63104 245 aaKnown RBP18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PITX1P78337 314 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CSRP2Q16527 193 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PIK3R6Q5UE93 754 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TMEM215Q68D42 235 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 RNF43Q68DV7 783 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 RFWD3Q6PCD5 774 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 IPO4Q8TEX9 1081 aaKnown RBP18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 RLN3Q8WXF3 142 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 IQCDQ96DY2 449 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SPAG5Q96R06 1193 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TRIM62Q9BVG3 475 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 BCCIPQ9P287 314 aaKnown RBP eCLIP18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 RAD54BQ9Y620 910 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ITIH6Q6UXX5 1313 aa18.56■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CNOT1A5YKK6 2376 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 GOLGA6L3A6NEY3 463 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 IRAK2O43187 625 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 TRUB2O95900 331 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CYP11B1P15538 503 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 HLA-FP30511 346 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 GBP1P32455 592 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 P2RY2P41231 377 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SLC11A2P49281 568 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 BPIFB4P59827 614 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 LMNB2Q03252 620 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 EIF4EBP2Q13542 120 aaPredicted RBP18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PTPN20Q4JDL3 420 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 FIGNQ5HY92 759 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PMS2CLQ68D20 193 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PRR23CQ6ZRP0 262 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 FAM183BPQ6ZVS7 135 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 FRMD1Q8N878 549 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 DLL3Q9NYJ7 618 aa18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 THAP10Q9P2Z0 257 aaPredicted RBP18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.55■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ERBB2P04626 1255 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 GLI1P08151 1106 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ENPP2Q13822 863 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ELF2Q15723 593 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CCDC6Q16204 474 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 RSPO4Q2I0M5 234 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MAP7D1Q3KQU3 841 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SPECC1LQ69YQ0 1117 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SDE2Q6IQ49 451 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 OLFML1Q6UWY5 402 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 C11orf74Q86VG3 221 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 WFDC5Q8TCV5 224 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 DDX1Q92499 740 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ERLEC1Q96DZ1 483 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MYEOVQ96EZ4 313 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PRICKLE1Q96MT3 831 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NOX5Q96PH1 765 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SLC2A13Q96QE2 648 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 IRX2Q9BZI1 471 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ASNSD1Q9NWL6 643 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ELOVL2Q9NXB9 296 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 XPO7Q9UIA9 1087 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PCDHGA5Q9Y5G8 931 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 STON1Q9Y6Q2 735 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NUMA1Q14980 2115 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 F8VZ95 297 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 RHOBTB1O94844 696 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CDH5P33151 784 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 IL12RB1P42701 662 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 ZNF75DP51815 510 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 EIF4HQ15056 248 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 DCAF6Q58WW2 860 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PLA2G2CQ5R387 149 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MPP7Q5T2T1 576 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 KIAA0907Q7Z7F0 614 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 VSTM4Q8IW00 320 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 DEFB106AQ8N104 65 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PGBD3Q8N328 593 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 UCMAQ8WVF2 138 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 SORCS1Q8WY21 1168 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 MRFAP1L1Q96HT8 127 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NUCKS1Q9H1E3 243 aaKnown RBP18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 CALCOCO1Q9P1Z2 691 aa18.54■□□□□ 0.56
TNFRSF1A-209ENST00000536717 PRR5-ARHGAP8B1AHC4 643 aa18.53■□□□□ 0.56
TNFRSF1A-209ENST00000536717 NPC1O15118 1278 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms