RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MT-ND3P03897 115 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 ALDH3A1P30838 453 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 FCGRTP55899 365 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-202ENST00000535906 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 E2F5Q15329 346 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 KCNA10Q16322 511 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 UNC5AQ6ZN44 842 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 SH2D5Q6ZV89 423 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 CTAGE3PQ8IX95 158 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 ZNF276Q8N554 614 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 PPM1NQ8N819 430 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 LRRC39Q96DD0 335 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 LRRC37BQ96QE4 947 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 CEP41Q9BYV8 373 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 SMYD2Q9NRG4 433 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 CDH9Q9ULB4 789 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 A0A0A0MRY4 1105 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 H3BRJ5 948 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 DCTN3O75935 186 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 FBXO21O94952 628 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 NCAM1P13591 858 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 PRKCHP24723 683 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 ADRA1BP35368 520 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 CAP1Q01518 475 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 AP1B1Q10567 949 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 DPYSQ14117 519 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 BZW1Q7L1Q6 419 aaKnown RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 SLC26A11Q86WA9 606 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 LRRC6Q86X45 466 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 C10orf82Q8WW14 230 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 ERP27Q96DN0 273 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 P2RY11Q96G91 374 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 SPATA13Q96N96 652 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 XPNPEP3Q9NQH7 507 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 CNGB3Q9NQW8 809 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 TRIM33Q9UPN9 1127 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 MAD1L1Q9Y6D9 718 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 WDR91A4D1P6 747 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 EEF2KO00418 725 aaKnown RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 TRDMT1O14717 391 aaKnown RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 UGT1A9O60656 530 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 B3GAT3O94766 335 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 APOEP02649 317 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 TM4SF4P48230 202 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 PRKCZQ05513 592 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 PRKD1Q15139 912 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 SEPT7Q16181 437 aaKnown RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 TRMT10BQ6PF06 316 aaKnown RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 RFX8Q6ZV50 586 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 BHLHA9Q7RTU4 235 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 OTOAQ7RTW8 1153 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 TBC1D31Q96DN5 1066 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 EBNA1BP2Q99848 306 aaKnown RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 PRDM12Q9H4Q4 367 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 UGT1A7Q9HAW7 530 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 UGT1A10Q9HAW8 530 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 UGT1A8Q9HAW9 530 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 MCM8Q9UJA3 840 aa13.79□□□□□ -0.2
VPS33B-202ENST00000535906 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.79□□□□□ -0.2
VPS33B-202ENST00000535906 RNF103O00237 685 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 DCLK1O15075 740 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 ZNF623O75123 536 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 PYGBP11216 843 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 CCND3P30281 292 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-202ENST00000535906 MAP2K2P36507 400 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 BRCC3P46736 316 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 NKX3-2P78367 333 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 CCNYQ8ND76 341 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 SMARCD1Q96GM5 515 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 SLC9A7Q96T83 725 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 PTCH2Q9Y6C5 1203 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 A0A0U1RQF3 1178 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 C9IYK1 514 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 LPXNO60711 386 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 LTFP02788 710 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 PCSK1P29120 753 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 GLUD2P49448 558 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 SLC18A2Q05940 514 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 LPIN1Q14693 890 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 PAFAH1B3Q15102 231 aaKnown RBP13.78□□□□□ -0.2
VPS33B-202ENST00000535906 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 PDCD7Q8N8D1 485 aaKnown RBP13.78□□□□□ -0.2
VPS33B-202ENST00000535906 AGAP11Q8TF27 550 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 EDEM1Q92611 657 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 MYLPFQ96A32 169 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 RAB3IPQ96QF0 476 aaPredicted RBP13.78□□□□□ -0.2
VPS33B-202ENST00000535906 VPS11Q9H270 941 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 PRDM16Q9HAZ2 1276 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 CSNK1G1Q9HCP0 422 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 XAB2Q9HCS7 855 aaKnown RBP13.78□□□□□ -0.2
VPS33B-202ENST00000535906 DDIT4Q9NX09 232 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 SEPT10Q9P0V9 454 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 FBXW11Q9UKB1 542 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 STK38LQ9Y2H1 464 aa13.78□□□□□ -0.2
VPS33B-202ENST00000535906 TLL2Q9Y6L7 1015 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms