RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 GCNAQ96QF7 691 aa11.21□□□□□ -0.61
UBE3B-205ENST00000535900 TLR10Q9BXR5 811 aa11.21□□□□□ -0.61
UBE3B-205ENST00000535900 TRIM7Q9C029 511 aa11.21□□□□□ -0.61
UBE3B-205ENST00000535900 CARD9Q9H257 536 aa11.21□□□□□ -0.61
UBE3B-205ENST00000535900 CHORDC1Q9UHD1 332 aaPredicted RBP11.21□□□□□ -0.61
UBE3B-205ENST00000535900 PCDHGA2Q9Y5H1 932 aa11.21□□□□□ -0.61
UBE3B-205ENST00000535900 PCDHA3Q9Y5H8 950 aa11.21□□□□□ -0.61
UBE3B-205ENST00000535900 FAM186AA6NE01 2351 aa11.21□□□□□ -0.62
UBE3B-205ENST00000535900 VPS13AQ96RL7 3174 aa11.21□□□□□ -0.62
UBE3B-205ENST00000535900 A0A1W2PQH9 124 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 TMEM110-MUSTN1A8MSY1 372 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 HEPACAM2A8MVW5 462 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 NRG2O14511 850 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 RIOK3O14730 519 aaKnown RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 PRPSAP2O60256 369 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 MOSPD3O75425 235 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 LRCH4O75427 683 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 SOAT2O75908 522 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 FTCDO95954 541 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 FYNP06241 537 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 DDX6P26196 483 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 RDXP35241 583 aaKnown RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 RWDD2BP57060 319 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 COPS2P61201 443 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 USP46P62068 366 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 OGDHQ02218 1023 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 ZNF252P-AS1Q0IIN9 211 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 PPP2R5DQ14738 602 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 ARL13BQ3SXY8 428 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 ARHGAP15Q53QZ3 475 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 BRMS1LQ5PSV4 323 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 SDHAF4Q5VUM1 108 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 POTEHQ6S545 545 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 RSRC2Q7L4I2 434 aaKnown RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 ZNF572Q7Z3I7 529 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 TMC8Q8IU68 726 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 KATNAL2Q8IYT4 538 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 FAM172AQ8WUF8 416 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 CLDN23Q96B33 292 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 BTBD6Q96KE9 485 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 ZSWIM3Q96MP5 696 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 CFAP57Q96MR6 1250 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 NAP1L3Q99457 506 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 PRDM16Q9HAZ2 1276 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 ZNF334Q9HCZ1 680 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 PRMT8Q9NR22 394 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 GMIPQ9P107 970 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 USP18Q9UMW8 372 aa11.2□□□□□ -0.62
UBE3B-205ENST00000535900 SMG5Q9UPR3 1016 aaKnown RBP11.2□□□□□ -0.62
UBE3B-205ENST00000535900 MYO16Q9Y6X6 1858 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 FAM170AA1A519 330 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 ZNF840PA6NDX5 716 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 ZNF487B1APH4 448 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 M0QYT0 321 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 MDM4O15151 490 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 GJB6O95452 261 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 TRUB2O95900 331 aaKnown RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 IGLV3-25P01717 112 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 ATP1A1P05023 1023 aaKnown RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 RARGP13631 454 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 MIPP30301 263 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 CXCR3P49682 368 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 SULT1E1P49888 294 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 PEX5P50542 639 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 CDR1P51861 262 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 RING1Q06587 406 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 SCAPQ12770 1279 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 IFRD2Q12894 506 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 MTAPQ13126 283 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 PDK2Q15119 407 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 HECTD3Q5T447 861 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 TRNP1Q6NT89 227 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 TSSK4Q6SA08 328 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 MAP7D3Q8IWC1 876 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 MFSD6LQ8IWD5 586 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 RCOR2Q8IZ40 523 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 EXD1Q8NHP7 514 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 DQX1Q8TE96 717 aaKnown RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 FAM3CQ92520 227 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 NDRG1Q92597 394 aaKnown RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 NTAN1Q96AB6 310 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 E2F7Q96AV8 911 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 MSANTD3Q96H12 275 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 RBM41Q96IZ5 413 aaKnown RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 IER2Q9BTL4 223 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 CHRDQ9H2X0 955 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 FAM204AQ9H8W3 233 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 TRPV4Q9HBA0 871 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 ZSCAN32Q9NX65 697 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 DNMT3LQ9UJW3 386 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 TTC7AQ9ULT0 858 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 MAGED2Q9UNF1 606 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 NAALADL1Q9UQQ1 740 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 TLR6Q9Y2C9 796 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 EFR3BQ9Y2G0 817 aa11.19□□□□□ -0.62
UBE3B-205ENST00000535900 HBS1LQ9Y450 684 aaKnown RBP11.19□□□□□ -0.62
UBE3B-205ENST00000535900 PTPRZ1P23471 2315 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms