RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FAM72CH0Y354 149 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 MBL2P11226 248 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 PFKLP17858 780 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 HARS2P49590 506 aaKnown RBP23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 DR1Q01658 176 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 OTUD4Q01804 1114 aaKnown RBP23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 NAA30Q147X3 362 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 FAM72AQ5TYM5 149 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 FAM72DQ6L9T8 149 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 FAM72BQ86X60 149 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 PLD5Q8N7P1 536 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 ACTL9Q8TC94 416 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 GRK7Q8WTQ7 553 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 PRKD2Q9BZL6 878 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 RNF38Q9H0F5 515 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 HCFC1R1Q9NWW0 138 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 CCDC195A0A1B0GUA6 201 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 A0A1W2PRU2 124 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 RFXAPO00287 272 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 RAD51CO43502 376 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 LIASO43766 372 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 LRIG2O94898 1065 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 AMPD1P23109 780 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 CYP4F8P98187 520 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 NRG1Q02297 640 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 DPYSQ14117 519 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 TXNDC8Q6A555 127 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 DRICH1Q6PGQ1 229 aaPredicted RBP23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 HS3ST4Q9Y661 456 aa23.69■■□□□ 1.38
RBFOX1-206ENST00000535565 TARSL2A2RTX5 802 aaKnown RBP23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 OLFM2O95897 454 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 HDCP19113 662 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 EPHB2P29323 1055 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 MLLT6P55198 1093 aaPredicted RBP23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 LMNB2Q03252 620 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 BYSLQ13895 437 aaKnown RBP23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 ZNF697Q5TEC3 545 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 TTC27Q6P3X3 843 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 CCDC114Q96M63 670 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 FAM118BQ9BPY3 351 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 KLF16Q9BXK1 252 aaPredicted RBP23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 DZANK1Q9NVP4 752 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 DNMT3BQ9UBC3 853 aaKnown RBP23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 SNX10Q9Y5X0 201 aa23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 HELZP42694 1942 aaKnown RBP23.68■■□□□ 1.38
RBFOX1-206ENST00000535565 TRAV19A0A0A6YYK7 116 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 TRANK1O15050 2925 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 MCF2LO15068 1137 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 RHOP08100 348 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 SRGAP2BP0DMP2 458 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 DDX6P26196 483 aaKnown RBP eCLIP23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 GGCXP38435 758 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 KCNQ1P51787 676 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 ARHGAP15Q53QZ3 475 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 PIK3R6Q5UE93 754 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 C1orf228Q6PIY5 440 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 LRRC31Q6UY01 552 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 BZW1Q7L1Q6 419 aaKnown RBP23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 ARL14EPQ8N8R7 260 aaPredicted RBP23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 ATL2Q8NHH9 583 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 TBC1D31Q96DN5 1066 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 ZNF576Q9H609 170 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 NSUN3Q9H649 340 aaKnown RBP23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 ANKZF1Q9H8Y5 726 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 SFXN1Q9H9B4 322 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 PIDD1Q9HB75 910 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 SAE1Q9UBE0 346 aaPredicted RBP23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 XPO7Q9UIA9 1087 aaKnown RBP23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 DNPEPQ9ULA0 475 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 HEY1Q9Y5J3 304 aa23.67■■□□□ 1.38
RBFOX1-206ENST00000535565 FAM187AA6NFU0 413 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 ECEL1O95672 775 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 CKMP06732 381 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 PECAM1P16284 738 aaPredicted RBP23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 KCNJ1P48048 391 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 NR2C2P49116 596 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 SLC11A2P49281 568 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 VCPP55072 806 aaKnown RBP23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 NOMO1Q15155 1222 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 MS4A13Q5J8X5 152 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 NCBP2-AS2Q69YL0 99 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 RWDD4Q6NW29 188 aaKnown RBP23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 TMCO3Q6UWJ1 677 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 MAB21L3Q8N8X9 362 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 RUBCNQ92622 972 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 SLCO2A1Q92959 643 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 NKD2Q969F2 451 aaPredicted RBP23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 DOCK6Q96HP0 2047 aa23.66■■□□□ 1.38
RBFOX1-206ENST00000535565 A0A1W2PPC1 479 aa23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 E9PAM4 449 aa23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 FGF10O15520 208 aaPredicted RBP23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 TTI1O43156 1089 aa23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 STC2O76061 302 aa23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 HEXIM1O94992 359 aaKnown RBP23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 GAS8O95995 478 aa23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 TUBBP07437 444 aa23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 ERCC2P18074 760 aa23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 EIF3EP60228 445 aaKnown RBP23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 MRPS25P82663 173 aaKnown RBP23.65■■□□□ 1.38
RBFOX1-206ENST00000535565 SLC7A5Q01650 507 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms