RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 EVLQ9UI08 416 aaPredicted RBP12.34□□□□□ -0.43
KNTC1-208ENST00000535410 NAALADL1Q9UQQ1 740 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 DAAM1Q9Y4D1 1078 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
KNTC1-208ENST00000535410 DCDC2BA2VCK2 349 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 BECN2A8MW95 431 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 E5RJQ4 531 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 FOXN3O00409 490 aaPredicted RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 PAPSS1O43252 624 aaPredicted RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 TBL1XO60907 577 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 HSF2BPO75031 334 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 CALCAP01258 141 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 DLDP09622 509 aaKnown RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 PABPC1P11940 636 aaKnown RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 NDUFV2P19404 249 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 BCKDHBP21953 392 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 ST8SIA6P61647 398 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 SFSWAPQ12872 951 aaKnown RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 PDCLQ13371 301 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 RAPGEF1Q13905 1077 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 ZNF234Q14588 700 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 CCDC6Q16204 474 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 FNDC3BQ53EP0 1204 aaKnown RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 TCP11X2Q5H9J9 407 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 WDR45BQ5MNZ6 344 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 FKBP15Q5T1M5 1219 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 GJB7Q6PEY0 223 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 KIAA1324Q6UXG2 1013 aaKnown RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 C11orf57Q6ZUT1 292 aaPredicted RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 CHST9Q7L1S5 443 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 C1orf131Q8NDD1 294 aaKnown RBP12.33□□□□□ -0.44
KNTC1-208ENST00000535410 FIBINQ8TAL6 211 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 CLEC4CQ8WTT0 213 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 RNF34Q969K3 372 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 SIPA1Q96FS4 1042 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 MRGPRX1Q96LB2 322 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 ABCB8Q9NUT2 735 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 ANO10Q9NW15 660 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 RRN3Q9NYV6 651 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 SUSD2Q9UGT4 822 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 GGA2Q9UJY4 613 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 HCN2Q9UL51 889 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 NFE2L3Q9Y4A8 694 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 PAXBP1Q9Y5B6 917 aa12.33□□□□□ -0.44
KNTC1-208ENST00000535410 GDF9O60383 454 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 TRUB2O95900 331 aaKnown RBP12.32□□□□□ -0.44
KNTC1-208ENST00000535410 MBD3O95983 291 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 ASLP04424 464 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 FYNP06241 537 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 EPHX1P07099 455 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 GNSP15586 552 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 CCR1P32246 355 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 IL12RB1P42701 662 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 ATXN3P54252 364 aaPredicted RBP12.32□□□□□ -0.44
KNTC1-208ENST00000535410 ZBTB16Q05516 673 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 ZNF33AQ06730 810 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 CDH18Q13634 790 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 DUOXA1Q1HG43 343 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 FUT11Q495W5 492 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 DCAF6Q58WW2 860 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 ACBD5Q5T8D3 534 aaPredicted RBP12.32□□□□□ -0.44
KNTC1-208ENST00000535410 TTC39BQ5VTQ0 682 aaPredicted RBP12.32□□□□□ -0.44
KNTC1-208ENST00000535410 KIAA1211LQ6NV74 962 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 TMPRSS6Q8IU80 811 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 MFN1Q8IWA4 741 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 SLC39A13Q96H72 371 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 FCRL2Q96LA5 508 aaPredicted RBP12.32□□□□□ -0.44
KNTC1-208ENST00000535410 EDEM2Q9BV94 578 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 NUP58Q9BVL2 599 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 FAM204AQ9H8W3 233 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 TMEM9BQ9NQ34 198 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 ITM2CQ9NQX7 267 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 KIAA1522Q9P206 1035 aaPredicted RBP12.32□□□□□ -0.44
KNTC1-208ENST00000535410 MBD1Q9UIS9 605 aaPredicted RBP12.32□□□□□ -0.44
KNTC1-208ENST00000535410 RAD54BQ9Y620 910 aa12.32□□□□□ -0.44
KNTC1-208ENST00000535410 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
KNTC1-208ENST00000535410 IGHV1OR15-9A0A0B4J2B8 117 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 WASH3PC4AMC7 463 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 F5H5T6 163 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 RNASEH1O60930 286 aaKnown RBP12.31□□□□□ -0.44
KNTC1-208ENST00000535410 MOCS2O96007 188 aaPredicted RBP12.31□□□□□ -0.44
KNTC1-208ENST00000535410 F9P00740 461 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 CD6P30203 668 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 HLA-FP30511 346 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 CLCN1P35523 988 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 NNMTP40261 264 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 PTGER3P43115 390 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 SLC6A3Q01959 620 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 GFPT1Q06210 699 aaPredicted RBP12.31□□□□□ -0.44
KNTC1-208ENST00000535410 SLC12A1Q13621 1099 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 DRAP1Q14919 205 aaPredicted RBP12.31□□□□□ -0.44
KNTC1-208ENST00000535410 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
KNTC1-208ENST00000535410 TRIM61Q5EBN2 209 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 MS4A13Q5J8X5 152 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 PPM1JQ5JR12 505 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 MIIPQ5JXC2 388 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 RABGAP1LQ5R372 815 aa12.31□□□□□ -0.44
KNTC1-208ENST00000535410 KLHDC7AQ5VTJ3 777 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms