RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 SLC2A11Q9BYW1 496 aa11.24□□□□□ -0.61
VAMP1-204ENST00000535180 PABPC3Q9H361 631 aaKnown RBP11.24□□□□□ -0.61
VAMP1-204ENST00000535180 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
VAMP1-204ENST00000535180 TMPRSS4Q9NRS4 437 aa11.24□□□□□ -0.61
VAMP1-204ENST00000535180 FBXL12Q9NXK8 326 aa11.24□□□□□ -0.61
VAMP1-204ENST00000535180 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
VAMP1-204ENST00000535180 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
VAMP1-204ENST00000535180 CLEC4EQ9ULY5 219 aa11.24□□□□□ -0.61
VAMP1-204ENST00000535180 PLA2G4CQ9UP65 541 aa11.24□□□□□ -0.61
VAMP1-204ENST00000535180 SPENQ96T58 3664 aaKnown RBP11.23□□□□□ -0.61
VAMP1-204ENST00000535180 CLDN5O00501 218 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 GIMD1P0DJR0 217 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 DGKAP23743 735 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 ABCD1P33897 745 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 TRAPPC10P48553 1259 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 SLC5A3P53794 718 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 PDE4CQ08493 712 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 SFSWAPQ12872 951 aaKnown RBP11.23□□□□□ -0.61
VAMP1-204ENST00000535180 OVGP1Q12889 678 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 TGIF1Q15583 401 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 ARSHQ5FYA8 562 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 KCTD17Q8N5Z5 321 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 MYCT1Q8N699 235 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 ZSCAN1Q8NBB4 408 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 HPDLQ96IR7 371 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 FAM84AQ96KN4 292 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 FUCA2Q9BTY2 467 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 RSPH9Q9H1X1 276 aaPredicted RBP11.23□□□□□ -0.61
VAMP1-204ENST00000535180 ZNF768Q9H5H4 540 aaKnown RBP11.23□□□□□ -0.61
VAMP1-204ENST00000535180 USP29Q9HBJ7 922 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 TLR8Q9NR97 1041 aaKnown RBP11.23□□□□□ -0.61
VAMP1-204ENST00000535180 SERGEFQ9UGK8 458 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 PLAAQ9Y263 795 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 ZNF510Q9Y2H8 683 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 NME7Q9Y5B8 376 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 PCDHGA7Q9Y5G6 932 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
VAMP1-204ENST00000535180 LY6G6EA0A0G2JKS1 128 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
VAMP1-204ENST00000535180 FFAR2O15552 330 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 SLC5A2P31639 672 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 CD97P48960 835 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 ZNF131P52739 623 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 TRIM29Q14134 588 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 POSTNQ15063 836 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 TTC38Q5R3I4 469 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 NAPEPLDQ6IQ20 393 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 KLHDC10Q6PID8 442 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 C14orf80Q86SX3 495 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 BRSK2Q8IWQ3 736 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 IFI44Q8TCB0 444 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 CYB5D2Q8WUJ1 264 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 POMGNT1Q8WZA1 660 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 MIB2Q96AX9 1013 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 REEP2Q9BRK0 252 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 NEUROG2Q9H2A3 272 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 SNX25Q9H3E2 840 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 EVA1BQ9NVM1 165 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 UCKL1Q9NWZ5 548 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 SUN2Q9UH99 717 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 ACSL6Q9UKU0 697 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 FZD4Q9ULV1 537 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 R3HCC1Q9Y3T6 440 aaKnown RBP11.22□□□□□ -0.61
VAMP1-204ENST00000535180 U3KQA8 63 aa11.22□□□□□ -0.61
VAMP1-204ENST00000535180 ESPL1Q14674 2120 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 CCDC187A0A096LP49 1063 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 A0A1W2PP55 124 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 LATO43561 262 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 STC2O76061 302 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 AGFG2O95081 481 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 KLKB1P03952 638 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 CYBBP04839 570 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.61
VAMP1-204ENST00000535180 PLA2G4BP0C869 781 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 CYP4F2P78329 520 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 ZRSR1Q15695 479 aaKnown RBP11.21□□□□□ -0.61
VAMP1-204ENST00000535180 HYIQ5T013 277 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 ZNF787Q6DD87 383 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 RBM44Q6ZP01 1051 aaKnown RBP11.21□□□□□ -0.61
VAMP1-204ENST00000535180 ATCAYQ86WG3 371 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 OR6B3Q8NGW1 331 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 HTR3CQ8WXA8 447 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 FIZ1Q96SL8 496 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 MRPL45Q9BRJ2 306 aaKnown RBP11.21□□□□□ -0.61
VAMP1-204ENST00000535180 FAM213AQ9BRX8 229 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 MTMR12Q9C0I1 747 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 DPEP3Q9H4B8 488 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 FBXO44Q9H4M3 255 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 PARVGQ9HBI0 331 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 OSER1Q9NX31 292 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 NLGN3Q9NZ94 848 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 TUBD1Q9UJT1 453 aa11.21□□□□□ -0.61
VAMP1-204ENST00000535180 SDK2Q58EX2 2172 aa11.2□□□□□ -0.62
VAMP1-204ENST00000535180 TACC1O75410 805 aa11.2□□□□□ -0.62
VAMP1-204ENST00000535180 TCEA3O75764 348 aa11.2□□□□□ -0.62
VAMP1-204ENST00000535180 RNASEH2AO75792 299 aaKnown RBP11.2□□□□□ -0.62
VAMP1-204ENST00000535180 FAM13AO94988 1023 aa11.2□□□□□ -0.62
VAMP1-204ENST00000535180 FAM163BP0C2L3 166 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms