RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 TAF5Q15542 800 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ZBTB6Q15916 424 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CCDC153Q494R4 210 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ACAD10Q6JQN1 1059 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 LRRC6Q86X45 466 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 PAF1Q8N7H5 531 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 C7orf31Q8N865 590 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CD99L2Q8TCZ2 262 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 HPS1Q92902 700 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 PGM2Q96G03 612 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 NSL1Q96IY1 281 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 FERMT1Q9BQL6 677 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 PCDH12Q9NPG4 1184 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 FBXO6Q9NRD1 293 aaPredicted RBP9.31□□□□□ -0.92
SF3B2-216ENST00000534765 C1orf112Q9NSG2 853 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.31□□□□□ -0.92
SF3B2-216ENST00000534765 SCN5AQ14524 2016 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TTC3P53804 2025 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 SMIM31A0A1B0GVY4 71 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 MEI4A8MW99 385 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TRMUO75648 421 aaKnown RBP9.31□□□□□ -0.92
SF3B2-216ENST00000534765 DARSP14868 501 aaKnown RBP9.31□□□□□ -0.92
SF3B2-216ENST00000534765 PMLP29590 882 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CDC16Q13042 620 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CLUL1Q15846 466 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TCTN1Q2MV58 587 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 KIAA0319Q5VV43 1072 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 NUDCD3Q8IVD9 361 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 SLC43A3Q8NBI5 491 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 C3orf58Q8NDZ4 430 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 OR6Y1Q8NGX8 325 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CKAP2Q8WWK9 683 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 GRAMD1AQ96CP6 724 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 BTBD10Q9BSF8 475 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CAAP1Q9H8G2 361 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TMEM30AQ9NV96 361 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 GTF3C4Q9UKN8 822 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ITGB1BP2Q9UKP3 347 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 AK5Q9Y6K8 562 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TRIOO75962 3097 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 EXOC1LA0A1B0GW35 172 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 PTGESO14684 152 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CDK4P11802 303 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TFE3P19532 575 aaPredicted RBP9.31□□□□□ -0.92
SF3B2-216ENST00000534765 MGAT5Q09328 741 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 MTFR1Q15390 333 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 GALNTL6Q49A17 601 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 NADK2Q4G0N4 442 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 MAP3K21Q5TCX8 1036 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 PLEKHA7Q6IQ23 1121 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 SCAIQ8N9R8 606 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 JOSD2Q8TAC2 188 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 INPP5DQ92835 1189 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 TTC17Q96AE7 1141 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 CPXM1Q96SM3 734 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 BCO2Q9BYV7 579 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 SLC7A5P2Q9GIP4 190 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ARL8BQ9NVJ2 186 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 ZNF212Q9UDV6 495 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 SPEGQ15772 3267 aa9.31□□□□□ -0.92
SF3B2-216ENST00000534765 A0A0A6YYK5 440 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 MATN2O00339 956 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 RCVRNP35243 200 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 CCNG1P51959 295 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 OTUD4Q01804 1114 aaKnown RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 CENPCQ03188 943 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 WASHC5Q12768 1159 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 MAMLD1Q13495 774 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 PTPN20Q4JDL3 420 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 GNASQ5JWF2 1037 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 EMC10Q5UCC4 262 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 KRT80Q6KB66 452 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ASRGL1Q7L266 308 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ZNF564Q8TBZ8 553 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 GATA6Q92908 595 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 FAM136AQ96C01 138 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 PARP2Q9UGN5 583 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 CASP8AP2Q9UKL3 1982 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 C15orf38-AP3S2A0A0A6YYH1 394 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 RECQL4O94761 1208 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 PHKA2P46019 1235 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 GEMIN4P57678 1058 aaKnown RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 RELAQ04206 551 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ITGADQ13349 1161 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 DUOXA2Q1HG44 320 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 PERM1Q5SV97 790 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 PAOXQ6QHF9 649 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 ARPINQ7Z6K5 226 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 UBA3Q8TBC4 463 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 MAELQ96JY0 434 aaKnown RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 GPATCH1Q9BRR8 931 aaKnown RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 TRIM56Q9BRZ2 755 aaKnown RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 PRMT7Q9NVM4 692 aaPredicted RBP9.3□□□□□ -0.92
SF3B2-216ENST00000534765 NDUFA13Q9P0J0 144 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 PACSIN3Q9UKS6 424 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 FADS3Q9Y5Q0 445 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 NRCAMQ92823 1304 aa9.3□□□□□ -0.92
SF3B2-216ENST00000534765 COL1A2P08123 1366 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms