RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 DLDP09622 509 aaKnown RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 CEACAM1P13688 526 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 POLR2EP19388 210 aaKnown RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 GABRB2P47870 512 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 CREB5Q02930 508 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 MS4A13Q5J8X5 152 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 EMC10Q5UCC4 262 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 TRIM72Q6ZMU5 477 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 SLC26A9Q7LBE3 791 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 IRF2BP1Q8IU81 584 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 FAM71AQ8IYT1 594 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 DQX1Q8TE96 717 aaKnown RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 HMGB4Q8WW32 186 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 PRCCQ92733 491 aaPredicted RBP10.8□□□□□ -0.68
CSDE1-217ENST00000534699 LMLNQ96KR4 655 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 MRGPRX1Q96LB2 322 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 ZSWIM1Q9BR11 485 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 SLC32A1Q9H598 525 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 SGK2Q9HBY8 427 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 CALCOCO1Q9P1Z2 691 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 GGA2Q9UJY4 613 aa10.8□□□□□ -0.68
CSDE1-217ENST00000534699 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 VCANP13611 3396 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 DHPSP49366 369 aaPredicted RBP10.79□□□□□ -0.68
CSDE1-217ENST00000534699 STX17P56962 302 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 ZNF234Q14588 700 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 RABGAP1LQ5R372 815 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 CHST9Q7L1S5 443 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 TMEM35BQ8NCS4 154 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 ANKRD20A12PQ8NF67 263 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 DNAAF2Q9NVR5 837 aaKnown RBP10.79□□□□□ -0.68
CSDE1-217ENST00000534699 WSB2Q9NYS7 404 aaPredicted RBP10.79□□□□□ -0.68
CSDE1-217ENST00000534699 TULP2O00295 520 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 BIN1O00499 593 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 CAPN9O14815 690 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 ALOX15BO15296 676 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 GABBR2O75899 941 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 MBD3O95983 291 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 NDUFV2P19404 249 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 NOS2P35228 1153 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 RDXP35241 583 aaKnown RBP10.79□□□□□ -0.68
CSDE1-217ENST00000534699 PDCLQ13371 301 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 TUBGCP2Q9BSJ2 902 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 KDM4CQ9H3R0 1056 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 CAPN10Q9HC96 672 aa10.79□□□□□ -0.68
CSDE1-217ENST00000534699 A0A1B0GTW7 788 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 TMEM8BA6NDV4 472 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 H0Y626 953 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 LUC7L3O95232 432 aaKnown RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 TRIM16O95361 564 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 BCKDHBP21953 392 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 CCR1P32246 355 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 ST8SIA6P61647 398 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 LPAL2Q16609 132 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 TTC31Q49AM3 519 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 ISM2Q6H9L7 571 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 ZNF783Q6ZMS7 281 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 ERCC4Q92889 916 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 PPP1R13BQ96KQ4 1090 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 STK33Q9BYT3 514 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 TPSD1Q9BZJ3 242 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 SIX2Q9NPC8 291 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 DNAJC12Q9UKB3 198 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 STAP1Q9ULZ2 295 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 SLC7A4O43246 635 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 RNASEH1O60930 286 aaKnown RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 FYNP06241 537 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 ACADMP11310 421 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 PMLP29590 882 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 KRT9P35527 623 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 PXNP49023 591 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 GSCP56915 257 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 RPL6Q02878 288 aaKnown RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 GFPT1Q06210 699 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 GEN1Q17RS7 908 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 FAM133BQ5BKY9 247 aaKnown RBP10.78□□□□□ -0.68
CSDE1-217ENST00000534699 PPM1JQ5JR12 505 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 MBLAC2Q68D91 279 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 DENND1BQ6P3S1 775 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 KAT5Q92993 513 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 SIPA1Q96FS4 1042 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 CACNA2D2Q9NY47 1150 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 ADAMTS1Q9UHI8 967 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 FZD4Q9ULV1 537 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 NCKAP1Q9Y2A7 1128 aa10.78□□□□□ -0.68
CSDE1-217ENST00000534699 METTL12A8MUP2 240 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 BECN2A8MW95 431 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 KCNU1A8MYU2 1149 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 PAPSS1O43252 624 aaPredicted RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 LETM1O95202 739 aaPredicted RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 ERBB2P04626 1255 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 HMBSP08397 361 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 SLC6A3Q01959 620 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 ZNF33AQ06730 810 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 CCDC15Q0P6D6 951 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 FUT11Q495W5 492 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
CSDE1-217ENST00000534699 C1orf74Q96LT6 269 aa10.77□□□□□ -0.69
CSDE1-217ENST00000534699 ANO10Q9NW15 660 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms