RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CYTH2Q99418 400 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 VAT1Q99536 393 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 RNF208Q9H0X6 261 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 HIPK3Q9H422 1215 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 ETNK1Q9HBU6 452 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 ABI2Q9NYB9 513 aaPredicted RBP13.82□□□□□ -0.2
BEST1-208ENST00000534553 OR12D3Q9UGF7 316 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 TEX264Q9Y6I9 313 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 TCRBV7S3A2A0A539 114 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 FGF10O15520 208 aaPredicted RBP13.81□□□□□ -0.2
BEST1-208ENST00000534553 CCL5P13501 91 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 CHN1P15882 459 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 HTRA3P83110 453 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 COG7P83436 770 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 ANKRD20A2Q5SQ80 823 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 ANKRD20A1Q5TYW2 823 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 FAM171A1Q5VUB5 890 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 ANKRD20A3Q5VUR7 823 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 MSANTD2Q6P1R3 559 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 FUT10Q6P4F1 479 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 CCNJLQ8IV13 435 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 SCN4BQ8IWT1 228 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 LZTR1Q8N653 840 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 CCDC110Q8TBZ0 833 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 ADAM32Q8TC27 787 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 HDAC11Q96DB2 347 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 P2RY11Q96G91 374 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 OLA1Q9NTK5 396 aaKnown RBP13.81□□□□□ -0.2
BEST1-208ENST00000534553 DONSONQ9NYP3 566 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 FNIP2Q9P278 1114 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 TANC1Q9C0D5 1861 aa13.81□□□□□ -0.2
BEST1-208ENST00000534553 FAM92AA1XBS5 289 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 TRDMT1O14717 391 aaKnown RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 MAGEA3P43357 314 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 GPX6P59796 221 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 NRG1Q02297 640 aaPredicted RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 PPIDQ08752 370 aaKnown RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 AP1B1Q10567 949 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 GPR17Q13304 367 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 PARP6Q2NL67 630 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 MSS51Q4VC12 460 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 TTC19Q6DKK2 380 aaPredicted RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 B4GALNT4Q76KP1 1039 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 NLRP14Q86W24 1093 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 ANKMY2Q8IV38 441 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 CCNYQ8ND76 341 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 SCAMP5Q8TAC9 235 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 MAML1Q92585 1016 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 SPATA17Q96L03 361 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 XPO6Q96QU8 1125 aaKnown RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 PRDM12Q9H4Q4 367 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 SSU72Q9NP77 194 aaKnown RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 CLIC5Q9NZA1 410 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 IL37Q9NZH6 218 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 IGSF9Q9P2J2 1179 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 RABGEF1Q9UJ41 708 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 ERI2A8K979 691 aaKnown RBP13.8□□□□□ -0.2
BEST1-208ENST00000534553 RASA4BC9J798 803 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 RNF103O00237 685 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 EBAG9O00559 213 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 RASA4O43374 803 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 MAP3K6O95382 1288 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 BRAFP15056 766 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 VAV1P15498 845 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 EPHB2P29323 1055 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 HOXC13P31276 330 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 RFC2P35250 354 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 ELK3P41970 407 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 SLC11A1P49279 550 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 RABGGTBP53611 331 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 GALNT2Q10471 571 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 ADGRD1Q6QNK2 874 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 SLC39A5Q6ZMH5 540 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 NAT9Q9BTE0 207 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 DHRS4Q9BTZ2 278 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 CATSPERBQ9H7T0 1116 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 MARCH5Q9NX47 278 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 NKIRAS1Q9NYS0 192 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 TRHDEQ9UKU6 1024 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 IKBKGQ9Y6K9 419 aa13.8□□□□□ -0.2
BEST1-208ENST00000534553 TMEM120BA0PK00 339 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 POC1B-GALNT4F8VUJ3 575 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 LRIG2O94898 1065 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 METTL18O95568 372 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 GALTP07902 379 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 OR4Q2P0C623 313 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 CPB1P15086 417 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 MSH2P43246 934 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 NRLP54845 237 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 RPL10AP62906 217 aaKnown RBP13.79□□□□□ -0.2
BEST1-208ENST00000534553 TMED2Q15363 201 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 ITPRIPL1Q6GPH6 555 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 DENND5BQ6ZUT9 1274 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 CYS1Q717R9 158 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 TRABD2AQ86V40 505 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 CEP57Q86XR8 500 aa13.79□□□□□ -0.2
BEST1-208ENST00000534553 LRRC49Q8IUZ0 686 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms