RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	CENPC	Q03188	943 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	NME3	Q13232	169 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	CRY1	Q16526	586 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	GEN1	Q17RS7	908 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	FIGN	Q5HY92	759 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	ARC	Q7LC44	396 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	ASCL5	Q7RTU5	278 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	TRMT11	Q7Z4G4	463 aa	Known RBP	15.06	■□□□□ 0
CTSB-231	ENST00000534382	NT5C3B	Q969T7	300 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	NPY6R	Q99463	290 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	C11orf70	Q9BRQ4	267 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	NUP58	Q9BVL2	599 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	TTYH3	Q9C0H2	523 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	NUCKS1	Q9H1E3	243 aa	Known RBP	15.06	■□□□□ 0
CTSB-231	ENST00000534382	ZDHHC4	Q9NPG8	344 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	SEPT11	Q9NVA2	429 aa	Known RBP	15.06	■□□□□ 0
CTSB-231	ENST00000534382	AIPL1	Q9NZN9	384 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	COX16	Q9P0S2	106 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	XPO7	Q9UIA9	1087 aa	Known RBP	15.06	■□□□□ 0
CTSB-231	ENST00000534382	TMEM59L	Q9UK28	342 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	HCN2	Q9UL51	889 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	STAP1	Q9ULZ2	295 aa		15.06	■□□□□ 0
CTSB-231	ENST00000534382	FANCM	Q8IYD8	2048 aa		15.05	■□□□□ 0
CTSB-231	ENST00000534382	PRR23A	A6NEV1	266 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	GFRA3	O60609	400 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	ADAM23	O75077	832 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	F9	P00740	461 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	NTSR1	P30989	418 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	PXN	P49023	591 aa	Predicted RBP	15.05	■□□□□ -0
CTSB-231	ENST00000534382	DGKE	P52429	567 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	PTP4A2	Q12974	167 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	MTA1	Q13330	715 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	ASIC2	Q16515	512 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	SLC25A52	Q3SY17	297 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	MS4A13	Q5J8X5	152 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	SFMBT2	Q5VUG0	894 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	EGFLAM	Q63HQ2	1017 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	RNF43	Q68DV7	783 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	TMEM92	Q6UXU6	159 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	ANKS1B	Q7Z6G8	1248 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	PHF13	Q86YI8	300 aa	Predicted RBP	15.05	■□□□□ -0
CTSB-231	ENST00000534382	TSTD1	Q8NFU3	115 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	MYEOV	Q96EZ4	313 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	PGAP3	Q96FM1	320 aa	Predicted RBP	15.05	■□□□□ -0
CTSB-231	ENST00000534382	PRICKLE1	Q96MT3	831 aa	Predicted RBP	15.05	■□□□□ -0
CTSB-231	ENST00000534382	TMEM51	Q9NW97	253 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	ADAM22	Q9P0K1	906 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	IFNK	Q9P0W0	207 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	EBF1	Q9UH73	591 aa		15.05	■□□□□ -0
CTSB-231	ENST00000534382	MYO18A	Q92614	2054 aa	Known RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	TYW5	A2RUC4	315 aa	Known RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	HR	O43593	1189 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	TIMM44	O43615	452 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	HNRNPL	P14866	589 aa	Known RBP eCLIP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	TFE3	P19532	575 aa	Predicted RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	TACR2	P21452	398 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	TNFAIP3	P21580	790 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	FLT3	P36888	993 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	SULT1E1	P49888	294 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	RPS24	P62847	133 aa	Known RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	OTUD1	Q5VV17	481 aa	Predicted RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	RAP1GAP2	Q684P5	730 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	SDE2	Q6IQ49	451 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	TRNP1	Q6NT89	227 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	SND1	Q7KZF4	910 aa	Known RBP eCLIP	15.04	■□□□□ -0	2e-44	■■■□□ 14.6
CTSB-231	ENST00000534382	PHLDB2	Q86SQ0	1253 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	CHSY1	Q86X52	802 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	CHPF	Q8IZ52	775 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	LGI2	Q8N0V4	545 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	ZNF557	Q8N988	423 aa	Predicted RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	SUMF1	Q8NBK3	374 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	HJURP	Q8NCD3	748 aa	Predicted RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	UCMA	Q8WVF2	138 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	TBCB	Q99426	244 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	SYT11	Q9BT88	431 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	ADAM33	Q9BZ11	813 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	EPC1	Q9H2F5	836 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	WDCP	Q9H6R7	721 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	POLM	Q9NP87	494 aa	Predicted RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	METTL5	Q9NRN9	209 aa	Known RBP	15.04	■□□□□ -0
CTSB-231	ENST00000534382	PIGV	Q9NUD9	493 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	ABCB8	Q9NUT2	735 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	ELOVL2	Q9NXB9	296 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	CALCOCO1	Q9P1Z2	691 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	STIM2	Q9P246	746 aa		15.04	■□□□□ -0
CTSB-231	ENST00000534382	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	15.03	■□□□□ -0
CTSB-231	ENST00000534382		A0A1W2PQJ5	194 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382		F5H5T6	163 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	AXIN1	O15169	862 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	ALDH1A2	O94788	518 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	CALB1	P05937	261 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	HLA-F	P30511	346 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	PRKCI	P41743	596 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	CXCR3	P49682	368 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	GSC	P56915	257 aa	Predicted RBP	15.03	■□□□□ -0
CTSB-231	ENST00000534382	DEUP1	Q05D60	604 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	SRSF5	Q13243	272 aa	Known RBP	15.03	■□□□□ -0
CTSB-231	ENST00000534382	EIF4H	Q15056	248 aa	Known RBP	15.03	■□□□□ -0
CTSB-231	ENST00000534382	E2F5	Q15329	346 aa		15.03	■□□□□ -0
CTSB-231	ENST00000534382	BRMS1L	Q5PSV4	323 aa		15.03	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms