RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 DNAJC8O75937 253 aaPredicted RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 FGF18O76093 207 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 BAIAP3O94812 1187 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 TPP2P29144 1249 aaPredicted RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 CHRNA3P32297 505 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 RPL10AP62906 217 aaKnown RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 SLC25A11Q02978 314 aaKnown RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 SLC25A52Q3SY17 297 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 LACTB2Q53H82 288 aaPredicted RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 ERMARDQ5T6L9 678 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 VSTM1Q6UX27 236 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 C16orf59Q7L2K0 433 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 PPP1R14CQ8TAE6 165 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 UHMK1Q8TAS1 419 aaKnown RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 SPATA18Q8TC71 538 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 TSNARE1Q96NA8 513 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 GORASP1Q9BQQ3 440 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 DDX23Q9BUQ8 820 aaKnown RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 WDR27A2RRH5 827 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 DPPA5A6NC42 116 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 PLTPP55058 493 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 TAF10Q12962 218 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 GPR17Q13304 367 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 ACAP1Q15027 740 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 TRADDQ15628 312 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 PLPP4Q5VZY2 271 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 CEP128Q6ZU80 1094 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 PRUNE1Q86TP1 453 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 GALNT15Q8N3T1 639 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 NIPA2Q8N8Q9 360 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 P3H4Q92791 437 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 KHSRPQ92945 711 aaKnown RBP eCLIP9.91□□□□□ -0.82
RTL1-201ENST00000534062 CYLDQ9NQC7 956 aa9.91□□□□□ -0.82
RTL1-201ENST00000534062 TTC7AQ9ULT0 858 aaPredicted RBP9.91□□□□□ -0.82
RTL1-201ENST00000534062 GRXCR1A8MXD5 290 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 MCF2LO15068 1137 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 SMIM24O75264 130 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 SOD2P04179 222 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 ATF2P15336 505 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 GBP1P32455 592 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 PCK1P35558 622 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 PPM1AP35813 382 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 COILP38432 576 aaPredicted RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 CARSP49589 748 aaKnown RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 TUBP50607 506 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 VEPH1Q14D04 833 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 KRT71Q3SY84 523 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 LRRC38Q5VT99 294 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 DARS2Q6PI48 645 aaKnown RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 NPNTQ6UXI9 565 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 YIPF2Q9BWQ6 316 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 FBXO44Q9H4M3 255 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 SEPT10Q9P0V9 454 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 ZFATQ9P243 1243 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 CXCL14O95715 111 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 USP46P62068 366 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 OTUD4Q01804 1114 aaKnown RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 PLD1Q13393 1074 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 TMEM240Q5SV17 173 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 EMC10Q5UCC4 262 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 ALS2CLQ60I27 953 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 PDZD4Q76G19 769 aaPredicted RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 ANKS1BQ7Z6G8 1248 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 JAMLQ86YT9 394 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 CMTR2Q8IYT2 770 aaKnown RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 SLC39A11Q8N1S5 342 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.9□□□□□ -0.82
RTL1-201ENST00000534062 ACTL9Q8TC94 416 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 CCT6BQ92526 530 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 VWCEQ96DN2 955 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 FUBP3Q96I24 572 aaKnown RBP eCLIP9.9□□□□□ -0.82
RTL1-201ENST00000534062 SEC16BQ96JE7 1060 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 SLITRK6Q9H5Y7 841 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 TRPC7Q9HCX4 862 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 PIGVQ9NUD9 493 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 DNAJC17Q9NVM6 304 aaKnown RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 PRRC2BQ5JSZ5 2229 aaKnown RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 hCG_1818297A0A087WSY0 165 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 LCHNA4D1U4 455 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 SCAMP3O14828 347 aaKnown RBP9.9□□□□□ -0.82
RTL1-201ENST00000534062 TBX18O95935 607 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 KLRC2P26717 231 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 PTPN9P43378 593 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 TFDP2Q14188 446 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 POLNQ7Z5Q5 900 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 CCNYQ8ND76 341 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 SLX1AQ9BQ83 275 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 TKTL2Q9H0I9 626 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 CRISPLD1Q9H336 500 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 VPS37BQ9H9H4 285 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 DNPEPQ9ULA0 475 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 SNX10Q9Y5X0 201 aa9.9□□□□□ -0.82
RTL1-201ENST00000534062 F5H423 210 aaPredicted RBP9.89□□□□□ -0.83
RTL1-201ENST00000534062 LIN7AO14910 233 aaPredicted RBP9.89□□□□□ -0.83
RTL1-201ENST00000534062 MYOGP15173 224 aa9.89□□□□□ -0.83
RTL1-201ENST00000534062 AMPD1P23109 780 aa9.89□□□□□ -0.83
RTL1-201ENST00000534062 CDKN2BP42772 138 aa9.89□□□□□ -0.83
RTL1-201ENST00000534062 EIF3EP60228 445 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms