RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 COPAP53621 1224 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 TBX4P57082 545 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 NCAPHQ15003 741 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 KRT31Q15323 416 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 EOGTQ5NDL2 527 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 ADGRF1Q5T601 910 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 CDKAL1Q5VV42 579 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 RAP1GAP2Q684P5 730 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 DGLUCYQ7Z3D6 616 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 DNAAF5Q86Y56 855 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 FAM71AQ8IYT1 594 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 APCDD1Q8J025 514 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 SCML4Q8N228 414 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 ARHGAP18Q8N392 663 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 CPXM2Q8N436 756 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 IRGQQ8WZA9 623 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 PIGKQ92643 395 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 PLD4Q96BZ4 506 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 XPO6Q96QU8 1125 aaKnown RBP10.02□□□□□ -0.81
SSBP3-215ENST00000533946 CIPCQ9C0C6 399 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-215ENST00000533946 CAAP1Q9H8G2 361 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 ELOVL2Q9NXB9 296 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 THAP10Q9P2Z0 257 aaPredicted RBP10.02□□□□□ -0.81
SSBP3-215ENST00000533946 STOML2Q9UJZ1 356 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 STRIP2Q9ULQ0 834 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 SLC27A6Q9Y2P4 619 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.81
SSBP3-215ENST00000533946 FREM2Q5SZK8 3169 aa10.02□□□□□ -0.81
SSBP3-215ENST00000533946 PCDH15Q96QU1 1955 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 LNP1A1A4G5 178 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 PES1O00541 588 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 CDX4O14627 284 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 CAVIN2O95810 425 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 TRUB2O95900 331 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 TOP3BO95985 862 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 MMEP08473 750 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 ATP1A3P13637 1013 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 VAV1P15498 845 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 TRIM21P19474 475 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 METAP1P53582 386 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 SLC8A3P57103 927 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 CENPCQ03188 943 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 GOLGA8FQ08AF8 430 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 GOLGA8DPQ0D2H9 430 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 CETN1Q12798 172 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 LMAN2Q12907 356 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 ENPP2Q13822 863 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 RAPGEF1Q13905 1077 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 PUM1Q14671 1186 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 TPD52L1Q16890 204 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 USP39Q53GS9 565 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 DCAF6Q58WW2 860 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 STPG1Q5TH74 334 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 RNF43Q68DV7 783 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 OLFML1Q6UWY5 402 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 KIAA1324Q6UXG2 1013 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 CHST9Q7L1S5 443 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 KIAA0907Q7Z7F0 614 aaPredicted RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 IGSF8Q969P0 613 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 TMA16Q96EY4 203 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 PPP1R13BQ96KQ4 1090 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 MRGPRX3Q96LB0 322 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 PCDHB18PQ96TA0 734 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 PRMT1Q99873 361 aaKnown RBP10.01□□□□□ -0.81
SSBP3-215ENST00000533946 DCLK3Q9C098 648 aa10.01□□□□□ -0.81
SSBP3-215ENST00000533946 CFAP47Q6ZTR5 3102 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 TPRP12270 2363 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 GTPBP10A4D1E9 387 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 C4orf47A7E2U8 309 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 PLK4O00444 970 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 SLC30A4O14863 429 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 IRAK2O43187 625 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 ADCY5O95622 1261 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 FGFR1OPO95684 399 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 UCHL3P15374 230 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 KCNA4P22459 653 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 MZF1P28698 734 aaPredicted RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 CHKAP35790 457 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 HARS2P49590 506 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 STK19P49842 368 aaPredicted RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 RNASE9P60153 205 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 LMNB2Q03252 620 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 AASDHQ4L235 1098 aaPredicted RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 MPPE1Q53F39 396 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 MS4A13Q5J8X5 152 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 SH3PXD2AQ5TCZ1 1133 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 MBLAC2Q68D91 279 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 OR6B2Q6IFH4 312 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 ANKS1BQ7Z6G8 1248 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 TADA2BQ86TJ2 420 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 FAM124AQ86V42 546 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 LGI2Q8N0V4 545 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 CARNMT1Q8N4J0 409 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 CPA5Q8WXQ8 436 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 SLC2A13Q96QE2 648 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 TMEM245Q9H330 911 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 POLMQ9NP87 494 aaPredicted RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 NLRC4Q9NPP4 1024 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms