RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 IGLV3-27P01718 113 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 ASLP04424 464 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 EPHX1P07099 455 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 PABPC1P11940 636 aaKnown RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 UCHL3P15374 230 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 GNSP15586 552 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 GABRG2P18507 467 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 NOS2P35228 1153 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 CLCN1P35523 988 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 LIMK1P53667 647 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 ATXN1P54253 815 aaKnown RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 RPL6Q02878 288 aaKnown RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 MESP2Q0VG99 397 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 SLC12A1Q13621 1099 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 SYCP1Q15431 976 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 FNDC3BQ53EP0 1204 aaKnown RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 MIIPQ5JXC2 388 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 WDR45BQ5MNZ6 344 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 RABGAP1LQ5R372 815 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 PLA2G2CQ5R387 149 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 SYPL2Q5VXT5 272 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 RNF219Q5W0B1 726 aaPredicted RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 KIAA1324Q6UXG2 1013 aaKnown RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 CHST9Q7L1S5 443 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 ZNF677Q86XU0 584 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 TMPRSS6Q8IU80 811 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 SYT12Q8IV01 421 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 MFN1Q8IWA4 741 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 CLEC4CQ8WTT0 213 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 RLN3Q8WXF3 142 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 SIPA1Q96FS4 1042 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 SPAG5Q96R06 1193 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 ACOX2Q99424 681 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 NUP58Q9BVL2 599 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 FAM204AQ9H8W3 233 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 PARD6AQ9NPB6 346 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 ITM2CQ9NQX7 267 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 CACNA2D2Q9NY47 1150 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 GGA2Q9UJY4 613 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 STAP1Q9ULZ2 295 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 FANCMQ8IYD8 2048 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 ATG2BQ96BY7 2078 aa9.98□□□□□ -0.81
FOXRED1-216ENST00000533839 USP34Q70CQ2 3546 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 A0A1W2PQF6 199 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 LRRC10BA6NIK2 292 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 KCNU1A8MYU2 1149 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 LSM8O95777 96 aaKnown RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 MOCS2O96007 188 aaPredicted RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 FYNP06241 537 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 DLDP09622 509 aaKnown RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 CYP11B1P15538 503 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 PTMSP20962 102 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 HOXD9P28356 352 aaPredicted RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 STAT1P42224 750 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 ATXN3P54252 364 aaPredicted RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 MYL5Q02045 173 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 ZBTB16Q05516 673 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 SULT2A1Q06520 285 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 CDH18Q13634 790 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 ZNF234Q14588 700 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 GEN1Q17RS7 908 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 DUOXA1Q1HG43 343 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 MAP7D1Q3KQU3 841 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 FILIP1LQ4L180 1135 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 ZC3H12AQ5D1E8 599 aaKnown RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 MS4A13Q5J8X5 152 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 TTC39BQ5VTQ0 682 aaPredicted RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 LYSMD4Q5XG99 296 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 MBLAC2Q68D91 279 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 RNF43Q68DV7 783 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 RFWD3Q6PCD5 774 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 LRRC31Q6UY01 552 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 RBM43Q6ZSC3 357 aaKnown RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 SLC47A2Q86VL8 602 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 SFTPA1Q8IWL2 248 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 TMEFF1Q8IYR6 380 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 DEFB106AQ8N104 65 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 CARNMT1Q8N4J0 409 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 KDM1BQ8NB78 822 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 ZNF397Q8NF99 534 aaPredicted RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 NEK11Q8NG66 645 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 GPT2Q8TD30 523 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 FCRL2Q96LA5 508 aaPredicted RBP9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 WDCPQ9H6R7 721 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 SIX2Q9NPC8 291 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 ZDHHC4Q9NPG8 344 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 ABCB8Q9NUT2 735 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 FANCLQ9NW38 375 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 DDIT4Q9NX09 232 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 TAB2Q9NYJ8 693 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.97□□□□□ -0.814e-49■■■■■ 168.5
FOXRED1-216ENST00000533839 CALCOCO1Q9P1Z2 691 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 SUSD2Q9UGT4 822 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 NCKAP1Q9Y2A7 1128 aa9.97□□□□□ -0.81
FOXRED1-216ENST00000533839 KIF26AQ9ULI4 1882 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms