RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 ALADP13716 330 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 CIITAP33076 1130 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 AGTR2P50052 363 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 DMWDQ09019 674 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 SEMA3BQ13214 749 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 PIK3CD-AS1Q5SR53 167 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 FAXCQ5TGI0 409 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 NXNQ6DKJ4 435 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 TTLL5Q6EMB2 1281 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 CAPRIN2Q6IMN6 1127 aaKnown RBP3.42□□□□□ -1.86
BRCA2-205ENST00000533776 USP43Q70EL4 1123 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-205ENST00000533776 SKAP1Q86WV1 359 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 DDIASQ8IXT1 998 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 IQCF1Q8N6M8 205 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 MED30Q96HR3 178 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 STRBPQ96SI9 672 aaKnown RBP3.42□□□□□ -1.86
BRCA2-205ENST00000533776 MEIS3Q99687 375 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 ZBTB26Q9HCK0 441 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 TXLNGQ9NUQ3 528 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 SELENONQ9NZV5 590 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 CORO2BQ9UQ03 480 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 INSL5Q9Y5Q6 135 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 SPATA31A5Q5VU36 1347 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 FRMPD2Q68DX3 1309 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-205ENST00000533776 SPATA31A7Q8IWB4 1347 aa3.42□□□□□ -1.86
BRCA2-205ENST00000533776 DPPA5A6NC42 116 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 IFITM10A6NMD0 228 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 VSTM5A8MXK1 200 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 COQ9O75208 318 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 HRGP04196 525 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 MMP8P22894 467 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 MLH1P40692 756 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 GSTM5P46439 218 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 NFE2Q16621 373 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 GLE1Q53GS7 698 aaKnown RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 CCDC144NLQ6NUI1 221 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 ACSM6Q6P461 480 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 PDXDC1Q6P996 788 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 CHST15Q7LFX5 561 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 KRT28Q7Z3Y7 464 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 SPATA2LQ8IUW3 424 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 OR52L2PQ8NGH6 319 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 TMEM174Q8WUU8 243 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 NUDCD2Q8WVJ2 157 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 ZFPM2Q8WW38 1151 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 ASB12Q8WXK4 309 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 FAM84BQ96KN1 310 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 GPR78Q96P69 363 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 PPP1R10Q96QC0 940 aaKnown RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 EIF3CQ99613 913 aaKnown RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 WDR83Q9BRX9 315 aaKnown RBP3.41□□□□□ -1.86
BRCA2-205ENST00000533776 BTBD1Q9H0C5 482 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 CDCP1Q9H5V8 836 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 PNPLA8Q9NP80 782 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 TMOD4Q9NZQ9 345 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 MDFICQ9P1T7 246 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 SLC8A2Q9UPR5 921 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 EID1Q9Y6B2 187 aa3.41□□□□□ -1.86
BRCA2-205ENST00000533776 RPS10-NUDT3A0A1W2PQS6 291 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 RHODO00212 210 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 ZSCAN9O15535 394 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-205ENST00000533776 KRT86O43790 486 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 WNT1P04628 370 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 FGF3P11487 239 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-205ENST00000533776 RPL17P18621 184 aaKnown RBP3.4□□□□□ -1.87
BRCA2-205ENST00000533776 MT3P25713 68 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 MST1P26927 711 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 ENTPD1P49961 510 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 LTBQ06643 244 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 SEMA5AQ13591 1074 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 DAG1Q14118 895 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 KRT81Q14533 505 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 NFATC4Q14934 902 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 P3H1Q32P28 736 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 KRTAP27-1Q3LI81 207 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 ASPHD1Q5U4P2 390 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 KLHDC7AQ5VTJ3 777 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 ISM2Q6H9L7 571 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 HMBOX1Q6NT76 420 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 ZNF474Q6S9Z5 364 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-205ENST00000533776 LRIG3Q6UXM1 1119 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 SLC39A5Q6ZMH5 540 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 NR2C2APQ86WQ0 139 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 LAS2Q8IYD9 372 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 CLASRPQ8N2M8 674 aaKnown RBP3.4□□□□□ -1.87
BRCA2-205ENST00000533776 CENPIQ92674 756 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-205ENST00000533776 ELOVL1Q9BW60 279 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 UNKQ9C0B0 810 aaKnown RBP3.4□□□□□ -1.87
BRCA2-205ENST00000533776 TCEAL9Q9UHQ7 104 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 LAMP3Q9UQV4 416 aa3.4□□□□□ -1.87
BRCA2-205ENST00000533776 ACOT8O14734 319 aa3.39□□□□□ -1.87
BRCA2-205ENST00000533776 PAPSS2O95340 614 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-205ENST00000533776 ACAA1P09110 424 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-205ENST00000533776 RHCEP18577 417 aa3.39□□□□□ -1.87
BRCA2-205ENST00000533776 KCNJ4P48050 445 aa3.39□□□□□ -1.87
BRCA2-205ENST00000533776 GBX1Q14549 363 aa3.39□□□□□ -1.87
BRCA2-205ENST00000533776 TRILQ7L0X0 811 aa3.39□□□□□ -1.87
BRCA2-205ENST00000533776 CCDC28AQ8IWP9 274 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms