RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 UGCGQ16739 394 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 AGAP9Q5VTM2 703 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 EEF1DP3Q658K8 133 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 PRUNE1Q86TP1 453 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 SAPCD2Q86UD0 394 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ANKMY2Q8IV38 441 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 DTX3LQ8TDB6 740 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 DNAJC19Q96DA6 116 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ZBTB10Q96DT7 871 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ROPN1BQ9BZX4 212 aaPredicted RBP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ROPN1Q9HAT0 212 aaPredicted RBP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF229Q9UJW7 825 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CCT8L1PA6NM43 557 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 SUPT3HB4E1H0 165 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 DNM1LO00429 736 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 TRUB2O95900 331 aaKnown RBP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 MSH3P20585 1137 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 SKOR1P84550 965 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 BRMS1LQ5PSV4 323 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ARMC12Q5T9G4 340 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CYB5D1Q6P9G0 228 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 NCLNQ969V3 563 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 MTMR8Q96EF0 704 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 NOD2Q9HC29 1040 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CRYBG1Q9Y4K1 1723 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 XPO1O14980 1071 aaKnown RBP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 CLASP2O75122 1294 aaKnown RBP11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 EFTUD2Q15029 972 aaKnown RBP eCLIP11.56□□□□□ -0.563e-12■■■■■ 63.9
AMBRA1-211ENST00000533727 CCNG2Q16589 344 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 RAD9BQ6WBX8 426 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 VPS37AQ8NEZ2 397 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 MFSD14AQ96MC6 490 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ERP44Q9BS26 406 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 SELENONQ9NZV5 590 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 ASB3Q9Y575 518 aa11.56□□□□□ -0.56
AMBRA1-211ENST00000533727 COL2A1P02458 1487 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SMIM28A0A1B0GU29 152 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 KPNA3O00505 521 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 PPP1R11O60927 126 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 DEAF1O75398 565 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 PRLRP16471 622 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 ANXA11P50995 505 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 TTC39BQ5VTQ0 682 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 FUT10Q6P4F1 479 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 FAM35AQ86V20 835 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SLC13A1Q9BZW2 595 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 POLR1EQ9GZS1 481 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 NXF3Q9H4D5 531 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 WDR41Q9HAD4 459 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 GGT7Q9UJ14 662 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 GRID1Q9ULK0 1009 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 DYRK1BQ9Y463 629 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 MTA2O94776 668 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 APODP05090 189 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 MYL2P10916 166 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 OTUD4Q01804 1114 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 ILDR2Q71H61 639 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 TRMT11Q7Z4G4 463 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 ARHGEF19Q8IW93 802 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 RGL4Q8IZJ4 473 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 EMC1Q8N766 993 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 MCCC1Q96RQ3 725 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 TMEM175Q9BSA9 504 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 TASP1Q9H6P5 420 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 WWOXQ9NZC7 414 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 VPS51Q9UID3 782 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 CHMP2BQ9UQN3 213 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 CNTNAP1P78357 1384 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 ERI2A8K979 691 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SMIM22K7EJ46 135 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF862O60290 1169 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 GLP2RO95838 553 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 CNTFP26441 200 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 GABRR2P28476 465 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 MAGEA4P43358 317 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SMAD3P84022 425 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 CDH17Q12864 832 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 CAPRIN1Q14444 709 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 HIC1Q14526 733 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 CNGA3Q16281 694 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SPDYE7PQ495Y7 208 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 PKN3Q6P5Z2 889 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SERPINA13PQ6UXR4 307 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 NYAP1Q6ZVC0 841 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 FICDQ9BVA6 458 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 NLNQ9BYT8 704 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 TKTL2Q9H0I9 626 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 COG4Q9H9E3 785 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 TSR3Q9UJK0 312 aaKnown RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 TSPAN1O60635 241 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 KRT8P05787 483 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 PTPN2P17706 415 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 SEC24CP53992 1094 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 GJA9P57773 515 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 PRKAA1Q13131 559 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 ZNF438Q7Z4V0 828 aa11.55□□□□□ -0.56
AMBRA1-211ENST00000533727 CXorf40AQ8TE69 158 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms