RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 GPR152Q8TDT2 470 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 DCAKDQ8WVC6 231 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 WDCPQ9H6R7 721 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 FGFR1OP2Q9NVK5 253 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
CLP1-205ENST00000533682 VWA8A3KMH1 1905 aa12.32□□□□□ -0.44
CLP1-205ENST00000533682 C5orf60A6NFR6 353 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 H3BRJ5 948 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 DCLK1O15075 740 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 UGT1A9O60656 530 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 HOXD10P28358 340 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 FOXN2P32314 431 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 GRIK1P39086 918 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 PBX3P40426 434 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 TCTN1Q2MV58 587 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 PM20D1Q6GTS8 502 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 C6orf89Q6UWU4 347 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 ARHGEF18Q6ZSZ5 1173 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 UNC5BQ8IZJ1 945 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 PDCD7Q8N8D1 485 aaKnown RBP12.31□□□□□ -0.44
CLP1-205ENST00000533682 UGT1A7Q9HAW7 530 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 UGT1A10Q9HAW8 530 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 UGT1A8Q9HAW9 530 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 HMX1Q9NP08 348 aaPredicted RBP12.31□□□□□ -0.44
CLP1-205ENST00000533682 DMAP1Q9NPF5 467 aaPredicted RBP12.31□□□□□ -0.44
CLP1-205ENST00000533682 PCDH10Q9P2E7 1040 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 OR12D3Q9UGF7 316 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 SFMBT1Q9UHJ3 866 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 MAD1L1Q9Y6D9 718 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 MOXD2PA6NHM9 499 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 RNF103O00237 685 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 NDC80O14777 642 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
CLP1-205ENST00000533682 NBNO60934 754 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 C1QAP02745 245 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 GRK4P32298 578 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 PHBP35232 272 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 WASHC5Q12768 1159 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 SPARCL1Q14515 664 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 SLC1A5Q15758 541 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 DDR2Q16832 855 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 C11orf91Q3C1V1 193 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 NOMO2Q5JPE7 1267 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 TRMT10BQ6PF06 316 aaKnown RBP12.31□□□□□ -0.44
CLP1-205ENST00000533682 ADGRD1Q6QNK2 874 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 SCN4BQ8IWT1 228 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 COLGALT2Q8IYK4 626 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLP1-205ENST00000533682 TTC9BQ8N6N2 239 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 COLGALT1Q8NBJ5 622 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 SIK2Q9H0K1 926 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 SMYD2Q9NRG4 433 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 ABI2Q9NYB9 513 aaPredicted RBP12.31□□□□□ -0.44
CLP1-205ENST00000533682 ZC3H7BQ9UGR2 993 aaKnown RBP12.31□□□□□ -0.44
CLP1-205ENST00000533682 SLC24A2Q9UI40 661 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 MCM8Q9UJA3 840 aa12.31□□□□□ -0.44
CLP1-205ENST00000533682 FAM47DPA6NHR8 397 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 SOAT2O75908 522 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 SRGAP2BP0DMP2 458 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 MSH2P43246 934 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 SLC5A3P53794 718 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 DSC1Q08554 894 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 RNF187Q5TA31 235 aaPredicted RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 GKAP1Q5VSY0 366 aaPredicted RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 NUGGCQ68CJ6 796 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 CEP57Q86XR8 500 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 PSTKQ8IV42 348 aaKnown RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 ZNF567Q8N184 647 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 THEM5Q8N1Q8 247 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 RIBC1Q8N443 379 aaPredicted RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 DBF4BQ8NFT6 615 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 DQX1Q8TE96 717 aaKnown RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 PXYLP1Q8TE99 480 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 MZB1Q8WU39 189 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 ZNF296Q8WUU4 475 aaPredicted RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 CKAP2Q8WWK9 683 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 RNF34Q969K3 372 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 DHRS4Q9BTZ2 278 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 CCDC134Q9H6E4 229 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 GGT7Q9UJ14 662 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 SCN5AQ14524 2016 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 CHUKO15111 745 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 LRIG2O94898 1065 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 PSMB4P28070 264 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 STX2P32856 288 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 VEGFBP49765 207 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 TPI1P60174 286 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 TSPY1Q01534 308 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 FAAP100Q0VG06 881 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 SPATA2LQ8IUW3 424 aaPredicted RBP12.3□□□□□ -0.44
CLP1-205ENST00000533682 CTAGE3PQ8IX95 158 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 CACNA2D3Q8IZS8 1091 aa12.3□□□□□ -0.44
CLP1-205ENST00000533682 SLC43A3Q8NBI5 491 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms