RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 ARTNQ5T4W7 220 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 FAM72AQ5TYM5 149 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 FAM72DQ6L9T8 149 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 POLNQ7Z5Q5 900 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 C14orf80Q86SX3 495 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 FAM72BQ86X60 149 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 PSTKQ8IV42 348 aaKnown RBP12.34□□□□□ -0.43
COMMD9-208ENST00000533643 RHOT1Q8IXI2 618 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 PYROXD2Q8N2H3 581 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 BPIFB1Q8TDL5 484 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 RSAD2Q8WXG1 361 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 HSPH1Q92598 858 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 KRT35Q92764 455 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 PRMT1Q99873 361 aaKnown RBP12.34□□□□□ -0.43
COMMD9-208ENST00000533643 SIK2Q9H0K1 926 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 LINC00597Q9H2U6 94 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 STOML2Q9UJZ1 356 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 AP4E1Q9UPM8 1137 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 HS3ST4Q9Y661 456 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 NUMBLQ9Y6R0 609 aa12.34□□□□□ -0.43
COMMD9-208ENST00000533643 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
COMMD9-208ENST00000533643 GFRA2O00451 464 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 TRDMT1O14717 391 aaKnown RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 SLC9A3R1O14745 358 aaPredicted RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 PSTPIP1O43586 416 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 KRT7P08729 469 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 PSMC3P17980 439 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 TACR2P21452 398 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 CTNNA2P26232 953 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 SLC6A4P31645 630 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 L1CAMP32004 1257 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 CTNNA1P35221 906 aaKnown RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 GGCXP38435 758 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 PEX5P50542 639 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 ARSEP51690 589 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 FCHO2Q0JRZ9 810 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 SEMA3BQ13214 749 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 AUHQ13825 339 aaKnown RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 GRM2Q14416 872 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 MEI1Q5TIA1 1274 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 RAP1GAP2Q684P5 730 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 RFWD3Q6PCD5 774 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 ADHFE1Q8IWW8 467 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 FAM217AQ8IXS0 508 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 ZNF683Q8IZ20 524 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 SLC35F6Q8N357 371 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 OSCP1Q8WVF1 389 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 ATXN2LQ8WWM7 1075 aaKnown RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 MYEOVQ96EZ4 313 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 ASIC4Q96FT7 647 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 HES6Q96HZ4 224 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 C1orf74Q96LT6 269 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 KCTD15Q96SI1 283 aaPredicted RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 DHX35Q9H5Z1 703 aaKnown RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 KLHL11Q9NVR0 708 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 THG1LQ9NWX6 298 aaKnown RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 TBC1D14Q9P2M4 693 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 OR12D3Q9UGF7 316 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 PRKAG3Q9UGI9 489 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 PCDHA3Q9Y5H8 950 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 WNT6Q9Y6F9 365 aa12.33□□□□□ -0.44
COMMD9-208ENST00000533643 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.44
COMMD9-208ENST00000533643 UNC80Q8N2C7 3258 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 MIF4GDA9UHW6 222 aaKnown RBP12.32□□□□□ -0.44
COMMD9-208ENST00000533643 DDX3YO15523 660 aaKnown RBP12.32□□□□□ -0.44
COMMD9-208ENST00000533643 TSPAN3O60637 253 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 BMP1P13497 986 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ARSAP15289 507 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 GNG11P61952 73 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 NRG1Q02297 640 aaPredicted RBP12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ZP2Q05996 745 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 DPYSL2Q16555 572 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 EML3Q32P44 896 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ACBD5Q5T8D3 534 aaPredicted RBP12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ZSCAN30Q86W11 494 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 CHSY1Q86X52 802 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 KATNAL2Q8IYT4 538 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ADGRG2Q8IZP9 1017 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 LGI2Q8N0V4 545 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 CPXM2Q8N436 756 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 FAM71BQ8TC56 605 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 DEPDC1BQ8WUY9 529 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 UBE2Q2Q8WVN8 375 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 RAPGEF5Q92565 580 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ALG3Q92685 438 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 NXPE3Q969Y0 559 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 OTUB2Q96DC9 234 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 P2RY11Q96G91 374 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 ASB2Q96Q27 587 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 WDR24Q96S15 920 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 DDX50Q9BQ39 737 aaKnown RBP12.32□□□□□ -0.44
COMMD9-208ENST00000533643 FAM83CQ9BQN1 747 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 KCNK12Q9HB15 430 aa12.32□□□□□ -0.44
COMMD9-208ENST00000533643 DUS2Q9NX74 493 aaKnown RBP12.32□□□□□ -0.44
COMMD9-208ENST00000533643 DDX56Q9NY93 547 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms