RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 SYT11Q9BT88 431 aa10.22□□□□□ -0.77
NUP98-220ENST00000533346 TTYH3Q9C0H2 523 aa10.22□□□□□ -0.77
NUP98-220ENST00000533346 POLMQ9NP87 494 aaPredicted RBP10.22□□□□□ -0.77
NUP98-220ENST00000533346 NLRC4Q9NPP4 1024 aa10.22□□□□□ -0.77
NUP98-220ENST00000533346 AIPL1Q9NZN9 384 aa10.22□□□□□ -0.77
NUP98-220ENST00000533346 THAP10Q9P2Z0 257 aaPredicted RBP10.22□□□□□ -0.77
NUP98-220ENST00000533346 DOCK4Q8N1I0 1966 aa10.22□□□□□ -0.77
NUP98-220ENST00000533346 ANTXRLA6NF34 631 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 SGK1O00141 431 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 TRIM24O15164 1050 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 AXIN1O15169 862 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 LRP3O75074 770 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 APOEP02649 317 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 FERP16591 822 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 HLA-FP30511 346 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 SLC6A4P31645 630 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 CCR1P32246 355 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 PRKCIP41743 596 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 CXCR3P49682 368 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.77
NUP98-220ENST00000533346 KDSRQ06136 332 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 PTP4A2Q12974 167 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 GEN1Q17RS7 908 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 ZSCAN23Q3MJ62 389 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 SLC25A52Q3SY17 297 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 DCAF6Q58WW2 860 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 BRMS1LQ5PSV4 323 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 LAIR1Q6GTX8 287 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 OR6B2Q6IFH4 312 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 ANKS1BQ7Z6G8 1248 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 ALLCQ8N6M5 410 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 ATP6V0D2Q8N8Y2 350 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 KDM1BQ8NB78 822 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 RUBCNQ92622 972 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 VCPIP1Q96JH7 1222 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 C1orf74Q96LT6 269 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 NAP1L5Q96NT1 182 aaPredicted RBP10.21□□□□□ -0.77
NUP98-220ENST00000533346 NUP58Q9BVL2 599 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 PDCL3Q9H2J4 239 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 CBX8Q9HC52 389 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 ELOVL2Q9NXB9 296 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 ARHGEF38Q9NXL2 777 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 PLK2Q9NYY3 685 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.21□□□□□ -0.77
NUP98-220ENST00000533346 SLC12A6Q9UHW9 1150 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 CLEC4EQ9ULY5 219 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 STAP1Q9ULZ2 295 aa10.21□□□□□ -0.77
NUP98-220ENST00000533346 TNRC6BQ9UPQ9 1833 aaKnown RBP10.21□□□□□ -0.78
NUP98-220ENST00000533346 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.78
NUP98-220ENST00000533346 A0A1W2PQF6 199 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 A0A1W2PQJ5 194 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 TCRBV5S1A1TA0A578 114 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 ALDH1A2O94788 518 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 KLF8O95600 359 aaPredicted RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 TIE1P35590 1138 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 PLK1P53350 603 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 TPM4P67936 248 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 PITX1P78337 314 aaPredicted RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 SLC12A1Q13621 1099 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 ZC3H12AQ5D1E8 599 aaKnown RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 SPDYCQ5MJ68 293 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 TTC39BQ5VTQ0 682 aaPredicted RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 OTUD1Q5VV17 481 aaPredicted RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 TMEM215Q68D42 235 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 CACNA2D4Q7Z3S7 1137 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 ADIPOR2Q86V24 386 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 AHI1Q8N157 1196 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 HJURPQ8NCD3 748 aaPredicted RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 TSTD1Q8NFU3 115 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 UCMAQ8WVF2 138 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 TTC17Q96AE7 1141 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 PRICKLE1Q96MT3 831 aaPredicted RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 PCDHB18PQ96TA0 734 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 AGPAT1Q99943 283 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 RETREG1Q9H6L5 497 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 SYNCQ9H7C4 482 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 SMG5Q9UPR3 1016 aaKnown RBP10.2□□□□□ -0.78
NUP98-220ENST00000533346 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
NUP98-220ENST00000533346 RALGAPA1Q6GYQ0 2036 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 CHD5Q8TDI0 1954 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 GOLGA6L7A0A1B0GV03 622 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 TYW5A2RUC4 315 aaKnown RBP10.19□□□□□ -0.78
NUP98-220ENST00000533346 M0QYT0 321 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 FOXD2O60548 495 aaPredicted RBP10.19□□□□□ -0.78
NUP98-220ENST00000533346 RPP40O75818 363 aaKnown RBP10.19□□□□□ -0.78
NUP98-220ENST00000533346 RETP07949 1114 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 GZMAP12544 262 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 ABCB4P21439 1286 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 TGM1P22735 817 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 SGSHP51688 502 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 SEC13P55735 322 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 OXCT1P55809 520 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 FANCCQ00597 558 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
NUP98-220ENST00000533346 BYSLQ13895 437 aaKnown RBP10.19□□□□□ -0.78
NUP98-220ENST00000533346 SIM2Q14190 667 aaPredicted RBP10.19□□□□□ -0.78
NUP98-220ENST00000533346 ARID5BQ14865 1188 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 CLEC16AQ2KHT3 1053 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 TAF3Q5VWG9 929 aa10.19□□□□□ -0.78
NUP98-220ENST00000533346 NAA35Q5VZE5 725 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms