RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ABCB4P21439 1286 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 GPD1P21695 349 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 DRD1P21728 446 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 CDC25BP30305 580 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 SGSHP51688 502 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 OGDHQ02218 1023 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 GFPT1Q06210 699 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 SLC18A3Q16572 532 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 MPPE1Q53F39 396 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 DGKKQ5KSL6 1271 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 BRMS1LQ5PSV4 323 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 CCDC122Q5T0U0 273 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 SFTPA1Q8IWL2 248 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 DDI1Q8WTU0 396 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 CENPIQ92674 756 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 EXOC4Q96A65 974 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 TMA16Q96EY4 203 aaKnown RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 PRICKLE1Q96MT3 831 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 XPO6Q96QU8 1125 aaKnown RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 DDX50Q9BQ39 737 aaKnown RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 IRX2Q9BZI1 471 aaPredicted RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 TMEM51Q9NW97 253 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 ARHGEF38Q9NXL2 777 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 DEC1Q9P2X7 70 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 CNOT8Q9UFF9 292 aaKnown RBP12.43□□□□□ -0.42
SSBP3-214ENST00000533209 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
SSBP3-214ENST00000533209 A0A0A0MRY4 1105 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 TMEM191CA6NGB0 347 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-214ENST00000533209 K7EQS6 105 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 CCP110O43303 1012 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 KAT7O95251 611 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 CISD3P0C7P0 127 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 TACR2P21452 398 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 HOXD9P28356 352 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-214ENST00000533209 RDXP35241 583 aaKnown RBP12.42□□□□□ -0.42
SSBP3-214ENST00000533209 GRIA2P42262 883 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 MAGEA9P43362 315 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 ZNF143P52747 638 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-214ENST00000533209 KDSRQ06136 332 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 LRRC32Q14392 662 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 GAS6Q14393 721 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 CDO1Q16878 200 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 MS4A13Q5J8X5 152 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 RAP1GAP2Q684P5 730 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 GRAMD4Q6IC98 578 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 DCUN1D2Q6PH85 259 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 Q6ZS52 159 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.42
SSBP3-214ENST00000533209 STRADAQ7RTN6 431 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 FAM131BQ86XD5 332 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 LGI2Q8N0V4 545 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 FAM172AQ8WUF8 416 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 TRIM7Q9C029 511 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 TKTL2Q9H0I9 626 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 THAP2Q9H0W7 228 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 CHRDQ9H2X0 955 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 WDCPQ9H6R7 721 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 NHEJ1Q9H9Q4 299 aaPredicted RBP12.42□□□□□ -0.42
SSBP3-214ENST00000533209 ARHGEF4Q9NR80 690 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 TMPRSS4Q9NRS4 437 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 DNAJC17Q9NVM6 304 aaKnown RBP12.42□□□□□ -0.42
SSBP3-214ENST00000533209 MYO1AQ9UBC5 1043 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 CLEC4EQ9ULY5 219 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 SCINQ9Y6U3 715 aa12.42□□□□□ -0.42
SSBP3-214ENST00000533209 ZNF318Q5VUA4 2279 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 MYOFQ9NZM1 2061 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 ANKRD62A6NC57 917 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 ANTXRLA6NF34 631 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 AKR1B10O60218 316 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 TBL1XO60907 577 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 PAGE1O75459 146 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 APODP05090 189 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 CYP1A2P05177 515 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
SSBP3-214ENST00000533209 FECHP22830 423 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 DGKGP49619 791 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 GALCP54803 685 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 HDAC4P56524 1084 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 RPS24P62847 133 aaKnown RBP12.41□□□□□ -0.42
SSBP3-214ENST00000533209 ZNF252P-AS1Q0IIN9 211 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 MTA1Q13330 715 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 FBXO43Q4G163 708 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 MPP7Q5T2T1 576 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 ARTNQ5T4W7 220 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 CHSY1Q86X52 802 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 SYNPOQ8N3V7 929 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 TERB1Q8NA31 727 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 DTWD2Q8NBA8 298 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 HJURPQ8NCD3 748 aaPredicted RBP12.41□□□□□ -0.42
SSBP3-214ENST00000533209 ARHGEF26Q96DR7 871 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 CCDC42Q96M95 316 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 PANX2Q96RD6 677 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 CNPY3Q9BT09 278 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 SLC2A11Q9BYW1 496 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 SPTLC3Q9NUV7 552 aa12.41□□□□□ -0.42
SSBP3-214ENST00000533209 SLC27A6Q9Y2P4 619 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms