RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MMRN1Q13201 1228 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 PABPC1LQ4VXU2 614 aaKnown RBP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 HECTD3Q5T447 861 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 CCDC185Q8N715 623 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 FAM161BQ96MY7 647 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 PRKD2Q9BZL6 878 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 TMPRSS4Q9NRS4 437 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 ANAPC1Q9H1A4 1944 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 SPTBN5Q9NRC6 3674 aaKnown RBP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 A0A1W2PRU2 124 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 IRAK2O43187 625 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 F9P00740 461 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 PTPN2P17706 415 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 GBP1P32455 592 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 PPP3CCP48454 512 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 PLTPP55058 493 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 EIF4EBP2Q13542 120 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 TAZQ16635 292 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 MSANTD2Q6P1R3 559 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 ELMSAN1Q6PJG2 1045 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 TMC5Q6UXY8 1006 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 PRUNE1Q86TP1 453 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 ZNF707Q96C28 371 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 LRCH3Q96II8 777 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 NCAPGQ9BPX3 1015 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 MAGEB5Q9BZ81 275 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 NACA2Q9H009 215 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 HOMER3Q9NSC5 361 aa19.15■□□□□ 0.66
SMPD1-208ENST00000533123 OLA1Q9NTK5 396 aaKnown RBP19.15■□□□□ 0.66
SMPD1-208ENST00000533123 LINC01565O15544 149 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 COCHO43405 550 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 CST8O60676 142 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 XYLBO75191 536 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 OAS2P29728 719 aaKnown RBP19.14■□□□□ 0.65
SMPD1-208ENST00000533123 ATP5C1P36542 298 aaKnown RBP19.14■□□□□ 0.65
SMPD1-208ENST00000533123 CCR2P41597 374 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 DRG2P55039 364 aaKnown RBP19.14■□□□□ 0.65
SMPD1-208ENST00000533123 CDH6P55285 790 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 CYP4F8P98187 520 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 ZC3H12AQ5D1E8 599 aaKnown RBP19.14■□□□□ 0.65
SMPD1-208ENST00000533123 TXNDC8Q6A555 127 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 ATL2Q8NHH9 583 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 FBXO25Q8TCJ0 367 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 RNF34Q969K3 372 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 SERPINB11Q96P15 392 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 RNF38Q9H0F5 515 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 ATXN3LQ9H3M9 355 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 WDCPQ9H6R7 721 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 TRPC7Q9HCX4 862 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 ANLNQ9NQW6 1124 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 MARCH2Q9P0N8 246 aa19.14■□□□□ 0.65
SMPD1-208ENST00000533123 AGPSO00116 658 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 GLP2RO95838 553 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 CXCR3P49682 368 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 NTHL1P78549 312 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 CA9Q16790 459 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 BOLA3Q53S33 107 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 GRASPQ7Z6J2 395 aaPredicted RBP19.13■□□□□ 0.65
SMPD1-208ENST00000533123 CYP2S1Q96SQ9 504 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 SNRNP25Q9BV90 132 aaKnown RBP19.13■□□□□ 0.65
SMPD1-208ENST00000533123 NEU2Q9Y3R4 380 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 TMEM265A0A087WTH1 108 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 GOLGA6BA6NDN3 693 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 I6L893 689 aaPredicted RBP19.13■□□□□ 0.65
SMPD1-208ENST00000533123 RHOP08100 348 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 GGCXP38435 758 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 VPS41P49754 854 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 ARSEP51690 589 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 DPYSL3Q14195 570 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 ADGRE1Q14246 886 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 ERMARDQ5T6L9 678 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 PRPF38BQ5VTL8 546 aaKnown RBP19.13■□□□□ 0.65
SMPD1-208ENST00000533123 RFX6Q8HWS3 928 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 MREGQ8N565 214 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 GRK7Q8WTQ7 553 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 TCEAL4Q96EI5 215 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 FMO2Q99518 471 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 TMEM51Q9NW97 253 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 ASIC3Q9UHC3 531 aa19.13■□□□□ 0.65
SMPD1-208ENST00000533123 POLR3GO15318 223 aaPredicted RBP19.12■□□□□ 0.65
SMPD1-208ENST00000533123 GAS8O95995 478 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 OAS1P00973 400 aaKnown RBP19.12■□□□□ 0.65
SMPD1-208ENST00000533123 HSPA9P38646 679 aaKnown RBP19.12■□□□□ 0.65
SMPD1-208ENST00000533123 PTK6Q13882 451 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 BYSLQ13895 437 aaKnown RBP19.12■□□□□ 0.65
SMPD1-208ENST00000533123 STXBP5Q5T5C0 1151 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 BBS12Q6ZW61 710 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 PDZD4Q76G19 769 aaPredicted RBP19.12■□□□□ 0.65
SMPD1-208ENST00000533123 TADA2BQ86TJ2 420 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 ZNF276Q8N554 614 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 MRPS31Q92665 395 aaKnown RBP19.12■□□□□ 0.65
SMPD1-208ENST00000533123 SLC22A12Q96S37 553 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 CDK5RAP1Q96SZ6 601 aaKnown RBP19.12■□□□□ 0.65
SMPD1-208ENST00000533123 APOL5Q9BWW9 433 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 TKTL2Q9H0I9 626 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 ACBD3Q9H3P7 528 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 PIDD1Q9HB75 910 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 LMCD1Q9NZU5 365 aa19.12■□□□□ 0.65
SMPD1-208ENST00000533123 DNMT3LQ9UJW3 386 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms