RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 RBP3P10745 1247 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SLC2A4P14672 509 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ETS1P14921 441 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 COPZ1P61923 177 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MYBPC1Q00872 1141 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 NET1Q7Z628 596 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 HDDC3Q8N4P3 179 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PNPT1Q8TCS8 783 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 FATE1Q969F0 183 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PABPC3Q9H361 631 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TUBB1Q9H4B7 451 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 RBM12Q9NTZ6 932 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TBC1D22BQ9NU19 505 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TRNAU1APQ9NX07 287 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 UPB1Q9UBR1 384 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 C3orf18Q9UK00 162 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 DMTF1Q9Y222 760 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MRASO14807 208 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ZBTB5O15062 677 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SNAP91O60641 907 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 VPS4BO75351 444 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 REM1O75628 298 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 A1BGP04217 495 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 HOXC9P31274 260 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 HALP42357 657 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ZNF234Q14588 700 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ZNF567Q8N184 647 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 GUF1Q8N442 669 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 CCDC24Q8N4L8 307 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 ZNF540Q8NDQ6 660 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 SRFBP1Q8NEF9 429 aaKnown RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 FRMD8P1Q9BZ68 369 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 TRIM9Q9C026 710 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 RBAKQ9NYW8 714 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 CCNL1Q9UK58 526 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-231ENST00000532463 MEMO1Q9Y316 297 aa8.3□□□□□ -1.08
CTNND1-231ENST00000532463 CCDC154A6NI56 674 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 DHX15O43143 795 aaKnown RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 KCNH1O95259 989 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 RLN2P04090 185 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 TPBGLP0DKB5 382 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 AFF1P51825 1210 aaKnown RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ILF2Q12905 390 aaKnown RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ZNF790Q6PG37 636 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 EEPD1Q7L9B9 569 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 PLCZ1Q86YW0 608 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 OR8H3Q8N146 312 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ZNF276Q8N554 614 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 TEX19Q8NA77 164 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ACTR8Q9H981 624 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 PCDH18Q9HCL0 1135 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 FAM49BQ9NUQ9 324 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 GIN1Q9NXP7 522 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 GMPPBQ9Y5P6 360 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 SIN3BO75182 1162 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 PLEKHA8P1O95397 391 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 MYL3P08590 195 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 GNAO1P09471 354 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 PDGFRBP09619 1106 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 RARBP10826 455 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 CPA3P15088 417 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 PTX3P26022 381 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ALDH1A3P47895 512 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ARFIP1P53367 373 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 LSM3P62310 102 aaKnown RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 MTAPQ13126 283 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 PRKAA1Q13131 559 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 IQGAP2Q13576 1575 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 INTS11Q5TA45 600 aaKnown RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 GALNT18Q6P9A2 607 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 FAM126BQ8IXS8 530 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 SLC20A1Q8WUM9 679 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 CCDC3Q9BQI4 270 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 TMEM117Q9H0C3 514 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 EXD2Q9NVH0 621 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 NCF1BA6NI72 391 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 NCF1CA8MVU1 366 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 H7C1W4 665 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 NADKO95544 446 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 NR2F6P10588 404 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 NCF1P14598 390 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ZNF37AP17032 561 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 SLC16A2P36021 539 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 CCNG1P51959 295 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 PRKAA2P54646 552 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ATP2C1P98194 919 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 FAM171BQ6P995 826 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 TRAPPC11Q7Z392 1133 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 TDRPQ86YL5 185 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 MARCH10Q8NA82 808 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 MCFD2Q8NI22 146 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ING5Q8WYH8 240 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 ANKRD7Q92527 254 aa8.29□□□□□ -1.08
CTNND1-231ENST00000532463 C11orf24Q96F05 449 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-231ENST00000532463 IKZF3Q9UKT9 509 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms