RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 BTN2A3PQ96KV6 586 aa23.85■■□□□ 1.41
CAPN1-222ENST00000532285 ACOX2Q99424 681 aa23.85■■□□□ 1.41
CAPN1-222ENST00000532285 GABRG3Q99928 467 aa23.85■■□□□ 1.41
CAPN1-222ENST00000532285 TPSD1Q9BZJ3 242 aa23.85■■□□□ 1.41
CAPN1-222ENST00000532285 FAM204AQ9H8W3 233 aa23.85■■□□□ 1.41
CAPN1-222ENST00000532285 SLC12A6Q9UHW9 1150 aa23.85■■□□□ 1.41
CAPN1-222ENST00000532285 THADAQ6YHU6 1953 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 TCRBV21S2A2A0A5A6 115 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 TBL1XO60907 577 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 DAB1O75553 588 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 MOCS2O96007 188 aaPredicted RBP23.84■■□□□ 1.41
CAPN1-222ENST00000532285 NOS2P35228 1153 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 SCNN1AP37088 669 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 WASP42768 502 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 SGSHP51688 502 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 NOMO3P69849 1222 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 PITX1P78337 314 aaPredicted RBP23.84■■□□□ 1.41
CAPN1-222ENST00000532285 RNF43Q68DV7 783 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 KBTBD6Q86V97 674 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 ATP6V0D2Q8N8Y2 350 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 ZNF557Q8N988 423 aaPredicted RBP23.84■■□□□ 1.41
CAPN1-222ENST00000532285 HJURPQ8NCD3 748 aaPredicted RBP23.84■■□□□ 1.41
CAPN1-222ENST00000532285 HMGB4Q8WW32 186 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 LOXL4Q96JB6 756 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 ZC3H10Q96K80 434 aaKnown RBP23.84■■□□□ 1.41
CAPN1-222ENST00000532285 DDIT4Q9NX09 232 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 ELOVL2Q9NXB9 296 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 RRN3Q9NYV6 651 aa23.84■■□□□ 1.41
CAPN1-222ENST00000532285 BCCIPQ9P287 314 aaKnown RBP eCLIP23.84■■□□□ 1.41
CAPN1-222ENST00000532285 SYCE3A1L190 88 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 TYW5A2RUC4 315 aaKnown RBP23.83■■□□□ 1.41
CAPN1-222ENST00000532285 ZBTB24O43167 697 aaPredicted RBP23.83■■□□□ 1.41
CAPN1-222ENST00000532285 CCR1P32246 355 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 FILIP1LQ4L180 1135 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 C11orf74Q86VG3 221 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 KIAA2013Q8IYS2 634 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 WFIKKN2Q8TEU8 576 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 SLC20A1Q8WUM9 679 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 CPA5Q8WXQ8 436 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 RNF34Q969K3 372 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 NUCKS1Q9H1E3 243 aaKnown RBP23.83■■□□□ 1.41
CAPN1-222ENST00000532285 CACNA2D2Q9NY47 1150 aa23.83■■□□□ 1.41
CAPN1-222ENST00000532285 THAP10Q9P2Z0 257 aaPredicted RBP23.83■■□□□ 1.41
CAPN1-222ENST00000532285 A0A1W2PQF6 199 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 KCNU1A8MYU2 1149 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 LRP3O75074 770 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 HLA-FP30511 346 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 MATKP42679 507 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 FMO1Q01740 532 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 IQCB1Q15051 598 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 MS4A13Q5J8X5 152 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 NAA35Q5VZE5 725 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 XYLT1Q86Y38 959 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 PGBD3Q8N328 593 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.82■■□□□ 1.4
CAPN1-222ENST00000532285 OLIG1Q8TAK6 271 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 CIPCQ9C0C6 399 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 RTN4Q9NQC3 1192 aaKnown RBP23.82■■□□□ 1.4
CAPN1-222ENST00000532285 ABCB8Q9NUT2 735 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.82■■□□□ 1.4
CAPN1-222ENST00000532285 STON1Q9Y6Q2 735 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 SDK1Q7Z5N4 2213 aa23.82■■□□□ 1.4
CAPN1-222ENST00000532285 ABCA7Q8IZY2 2146 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 CEP192Q8TEP8 1941 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 SYNJ2BP-COX16A0A087WUM0 186 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 DCLK1O15075 740 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 TEX33O43247 280 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 CHRNB2P17787 502 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 ABCB4P21439 1286 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 RNASE9P60153 205 aaKnown RBP23.81■■□□□ 1.4
CAPN1-222ENST00000532285 ARID5AQ03989 594 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 MTA1Q13330 715 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 BYSLQ13895 437 aaKnown RBP23.81■■□□□ 1.4
CAPN1-222ENST00000532285 ELF2Q15723 593 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 PLK5Q496M5 336 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 FAM102AQ5T9C2 384 aaPredicted RBP23.81■■□□□ 1.4
CAPN1-222ENST00000532285 TMEM215Q68D42 235 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 TRIM72Q6ZMU5 477 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 KIAA0907Q7Z7F0 614 aaPredicted RBP23.81■■□□□ 1.4
CAPN1-222ENST00000532285 PRICKLE1Q96MT3 831 aaPredicted RBP23.81■■□□□ 1.4
CAPN1-222ENST00000532285 COX16Q9P0S2 106 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 STIM2Q9P246 746 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 XPO7Q9UIA9 1087 aaKnown RBP23.81■■□□□ 1.4
CAPN1-222ENST00000532285 GGA2Q9UJY4 613 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 INVSQ9Y283 1065 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 CKAP5Q14008 2032 aa23.81■■□□□ 1.4
CAPN1-222ENST00000532285 DMXL1Q9Y485 3027 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 WASH3PC4AMC7 463 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 RHOBTB1O94844 696 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 CYP1A1P04798 512 aaPredicted RBP23.8■■□□□ 1.4
CAPN1-222ENST00000532285 PABPC1P11940 636 aaKnown RBP23.8■■□□□ 1.4
CAPN1-222ENST00000532285 GABRG2P18507 467 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 TACR2P21452 398 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 RPS24P62847 133 aaKnown RBP23.8■■□□□ 1.4
CAPN1-222ENST00000532285 ENPP2Q13822 863 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 SKOR2Q2VWA4 1001 aaPredicted RBP23.8■■□□□ 1.4
CAPN1-222ENST00000532285 CHSY1Q86X52 802 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 MFN1Q8IWA4 741 aa23.8■■□□□ 1.4
CAPN1-222ENST00000532285 CCDC117Q8IWD4 279 aaPredicted RBP23.8■■□□□ 1.4
CAPN1-222ENST00000532285 LGI2Q8N0V4 545 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms