RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DPYSL3Q14195 570 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 KRT81Q14533 505 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 DPYSL2Q16555 572 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 SOWAHAQ2M3V2 549 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 MFSD14CQ5VZR4 134 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 KAZNQ674X7 775 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 SLC9A4Q6AI14 798 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 RGMBQ6NW40 437 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 FAM183BPQ6ZVS7 135 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 CPLX4Q7Z7G2 160 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 PHLDB2Q86SQ0 1253 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 RFX6Q8HWS3 928 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 CDKL3Q8IVW4 592 aaPredicted RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 CACNA2D3Q8IZS8 1091 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 SCML4Q8N228 414 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 ARFGAP1Q8N6T3 406 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 GBP7Q8N8V2 638 aaPredicted RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 OR6B3Q8NGW1 331 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 ZNF473Q8WTR7 871 aaKnown RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 RXFP2Q8WXD0 754 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 KCTD13Q8WZ19 329 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 PRCCQ92733 491 aaPredicted RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 C18orf25Q96B23 403 aaPredicted RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 ALKBH8Q96BT7 664 aaKnown RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 GRAMD1AQ96CP6 724 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 ZNF668Q96K58 619 aaPredicted RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 SPACA7Q96KW9 195 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 RNF157Q96PX1 679 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 SLC9A7Q96T83 725 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 OSMRQ99650 979 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 HNRNPABQ99729 332 aaKnown RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 C11orf84Q9BUA3 381 aaPredicted RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 DDX23Q9BUQ8 820 aaKnown RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 CALN1Q9BXU9 219 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 EIF2AQ9BY44 585 aaKnown RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 CEP41Q9BYV8 373 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 ZWILCHQ9H900 591 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 ACTR5Q9H9F9 607 aaPredicted RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.78□□□□□ -1.48
PCF11-205ENST00000530906 SNTG2Q9NY99 539 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 EURLQ9NYK6 297 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 NKIRAS1Q9NYS0 192 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 HMGXB4Q9UGU5 601 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 CPA4Q9UI42 421 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 GJD2Q9UKL4 321 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 STAP1Q9ULZ2 295 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 GIT1Q9Y2X7 761 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 TRPV2Q9Y5S1 764 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 RAD54BQ9Y620 910 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 PTCH2Q9Y6C5 1203 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 OAS3Q9Y6K5 1087 aaKnown RBP5.78□□□□□ -1.48
PCF11-205ENST00000530906 SQORQ9Y6N5 450 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 FAM169AQ9Y6X4 670 aa5.78□□□□□ -1.48
PCF11-205ENST00000530906 SCN1AP35498 2009 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 TRIP11Q15643 1979 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 EXOC1LA0A1B0GW35 172 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 MYO1CO00159 1063 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 IGF2BP3O00425 579 aaKnown RBP eCLIP5.77□□□□□ -1.49
PCF11-205ENST00000530906 GABRDO14764 452 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 APOL1O14791 398 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PPP1R12AO14974 1030 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 GPR182O15218 404 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PRPF4O43172 522 aaKnown RBP eCLIP5.77□□□□□ -1.49
PCF11-205ENST00000530906 PAPSS1O43252 624 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 ADCY6O43306 1168 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CA12O43570 354 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ADAM11O75078 769 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ZNF623O75123 536 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ADAMTS4O75173 837 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CSDE1O75534 798 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 DAB1O75553 588 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 FAM155BO75949 473 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CABYRO75952 493 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 STK10O94804 968 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 GJB6O95452 261 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CPP00450 1065 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 IFNB1P01574 187 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 MYL3P08590 195 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 GHRP10912 638 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CHN1P15882 459 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 TCF4P15884 667 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PECAM1P16284 738 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 EPHA1P21709 976 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CST5P28325 142 aaPredicted RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 PCSK1P29120 753 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CHKAP35790 457 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 MATKP42679 507 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 FCGRTP55899 365 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 BCAR1P56945 870 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 GEMIN4P57678 1058 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 LILRA4P59901 499 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 SARNPP82979 210 aaKnown RBP5.77□□□□□ -1.49
PCF11-205ENST00000530906 IL9RQ01113 521 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 PDE4CQ08493 712 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ITIH4Q14624 930 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 KYNUQ16719 465 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 SLC25A52Q3SY17 297 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CCDC14Q49A88 953 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 ATP13A4Q4VNC1 1196 aa5.77□□□□□ -1.49
PCF11-205ENST00000530906 CCDC38Q502W7 563 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms