RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
LTBP3-218ENST00000530866 CHKBQ9Y259 395 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 DNAJC16Q9Y2G8 782 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 PCDHGA4Q9Y5G9 962 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 KNL1Q8NG31 2342 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
LTBP3-218ENST00000530866 CCDC22O60826 627 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 UNC5CO95185 931 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 KRT75O95678 551 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 CDKN2BP42772 138 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 AP3M2P53677 418 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 SIX1Q15475 284 aaPredicted RBP13.05□□□□□ -0.32
LTBP3-218ENST00000530866 EXOC8Q8IYI6 725 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 APPL2Q8NEU8 664 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 MTBPQ96DY7 904 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 DNAI2Q9GZS0 605 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 CDHR5Q9HBB8 845 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 GTSE1Q9NYZ3 720 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 ANKRD12Q6UB98 2062 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 MAGEB2O15479 319 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 HOXC6P09630 235 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 OLIG2Q13516 323 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 CXCL17Q6UXB2 119 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 PIGWQ7Z7B1 504 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 PYROXD2Q8N2H3 581 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 AGGF1Q8N302 714 aaeCLIP13.05□□□□□ -0.321e-7■■■□□ 18.5
LTBP3-218ENST00000530866 PPP1R14BQ96C90 147 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 DCLRE1BQ9H816 532 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 NMRK1Q9NWW6 199 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 SHOC2Q9UQ13 582 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 SBF2Q86WG5 1849 aa13.05□□□□□ -0.32
LTBP3-218ENST00000530866 COL4A5P29400 1685 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 EVPLQ92817 2033 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ZWINTO95229 277 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ACADSP16219 412 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 MGAT1P26572 445 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PGGT1BP53609 377 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 TRMT10BQ6PF06 316 aaKnown RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PHF13Q86YI8 300 aaPredicted RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 TNS4Q8IZW8 715 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 SPATA6LQ8N4H0 392 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 SDCBP2Q9H190 292 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PAK5Q9P286 719 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 SLC39A10Q9ULF5 831 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 AP4E1Q9UPM8 1137 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 GON4LQ3T8J9 2241 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 GMNNO75496 209 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 B3GAT3O94766 335 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ENO3P13929 434 aaPredicted RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 SNX16P57768 344 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 TAP1Q03518 808 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PPIDQ08752 370 aaKnown RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ADIGQ0VDE8 80 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ACVR2BQ13705 512 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 CA9Q16790 459 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 TCHHL1Q5QJ38 904 aaPredicted RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PMF1Q6P1K2 205 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 SNRNP25Q9BV90 132 aaKnown RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 CNTNAP2Q9UHC6 1331 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 LY75O60449 1722 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 NCAM1P13591 858 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 BST1Q10588 318 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 FOXD4Q12950 439 aaPredicted RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ITGA9Q13797 1035 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ZNF618Q5T7W0 954 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 ZNF554Q86TJ5 538 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PPWD1Q96BP3 646 aaKnown RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 SYT11Q9BT88 431 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 DCUN1D5Q9BTE7 237 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
LTBP3-218ENST00000530866 PRG3Q9Y2Y8 225 aaPredicted RBP13.04□□□□□ -0.32
LTBP3-218ENST00000530866 SPTLC1O15269 473 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 MAGEB3O15480 346 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 USP1O94782 785 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 IL18RAPO95256 599 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 CYP1A1P04798 512 aaPredicted RBP13.03□□□□□ -0.32
LTBP3-218ENST00000530866 HMBSP08397 361 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 LMO2P25791 158 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 ANKRD31Q8N7Z5 1873 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 BARX2Q9UMQ3 279 aaPredicted RBP13.03□□□□□ -0.32
LTBP3-218ENST00000530866 ITM2BQ9Y287 266 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 TREHO43280 583 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 SERPINB5P36952 375 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 SLC25A3Q00325 362 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 CMC1Q7Z7K0 106 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 STKLD1Q8NE28 680 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 FAM13CQ8NE31 585 aa13.03□□□□□ -0.32
LTBP3-218ENST00000530866 MOCOSQ96EN8 888 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms