RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 ACADSBP45954 432 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 CTBP1Q13363 440 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 FBXO48Q5FWF7 155 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 TMTC4Q5T4D3 741 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 FAM43BQ6ZT52 329 aaPredicted RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 SUGP1Q8IWZ8 645 aaKnown RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 ST13P4Q8IZP2 240 aaPredicted RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 ZNF512Q96ME7 567 aaPredicted RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 Q9H521 79 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 CHKBQ9Y259 395 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 GNGT2O14610 69 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 VHLP40337 213 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 CHSY1Q86X52 802 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 BBS5Q8N3I7 341 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 CCDC185Q8N715 623 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 FAM13CQ8NE31 585 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 HAPLN2Q9GZV7 340 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 AAASQ9NRG9 546 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 PNPOQ9NVS9 261 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 PKD1L3Q7Z443 1732 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 C17orf102A2RUQ5 167 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 PRR5-ARHGAP8B1AHC4 643 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 XPO1O14980 1071 aaKnown RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 HOXC6P09630 235 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 PTPN7P35236 360 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 ARHGAP8P85298 464 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 TWF1Q12792 350 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 MED21Q13503 144 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 C6orf10Q5SRN2 563 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 MPP5Q8N3R9 675 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 PPHLN1Q8NEY8 458 aaKnown RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 SENP8Q96LD8 212 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 TEPSINQ96N21 525 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 NDNQ99608 321 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 BTBD10Q9BSF8 475 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 MRPL46Q9H2W6 279 aaKnown RBP12.69□□□□□ -0.38
SCN3B-206ENST00000530277 DCLRE1BQ9H816 532 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 CRYL1Q9Y2S2 319 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 ITGB4P16144 1822 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 MYH1P12882 1939 aa12.69□□□□□ -0.38
SCN3B-206ENST00000530277 ERI2A8K979 691 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 TM9SF1O15321 606 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 PEX1O43933 1283 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 ERCC2P18074 760 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CALB2P22676 271 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 PTDSS1P48651 473 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CXCR3P49682 368 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SLC26A2P50443 739 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CERCAMQ5T4B2 595 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SCG3Q8WXD2 468 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 EME1Q96AY2 570 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 NDFIP2Q9NV92 336 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 DRG1Q9Y295 367 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 GLRA3O75311 464 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 HADHAP40939 763 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 PAPOLAP51003 745 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 MGAT5Q09328 741 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 FLOT2Q14254 428 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 DLG2Q15700 870 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 DCAF4L1Q3SXM0 396 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 FUT11Q495W5 492 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 ZNF470Q6ECI4 717 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 MTHFD1LQ6UB35 978 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CYP2R1Q6VVX0 501 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 ZC3H3Q8IXZ2 948 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 MIEF2Q96C03 454 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 MOCOSQ96EN8 888 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CNBD2Q96M20 576 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 KCNK16Q96T55 309 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 ILKAPQ9H0C8 392 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SMCHD1A6NHR9 2005 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CXorf49A8MYA2 514 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 E5RI56 91 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CILPO75339 1184 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 OR4Q2P0C623 313 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 PCSK1P29120 753 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 ATICP31939 592 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 BRCC3P46736 316 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 RTP1P59025 263 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CDK16Q00536 496 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 ZNF618Q5T7W0 954 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 PDPK2PQ6A1A2 396 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 MFSD5Q6N075 450 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 RFWD3Q6PCD5 774 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 ANKS1BQ7Z6G8 1248 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 CLNKQ7Z7G1 428 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
SCN3B-206ENST00000530277 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 EGFL8Q99944 293 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 SDCBP2Q9H190 292 aa12.68□□□□□ -0.38
SCN3B-206ENST00000530277 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms