RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 USP39Q53GS9 565 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 DCAF17Q5H9S7 520 aaPredicted RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 ARHGEF16Q5VV41 709 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 LRRC8DQ7L1W4 858 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 CHST3Q7LGC8 479 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 PPP1R3BQ86XI6 285 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 ADGRF4Q8IZF3 695 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 SLC35A4Q96G79 324 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 RMDN3Q96TC7 470 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 B3GNT5Q9BYG0 378 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 DIAPH3Q9NSV4 1193 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 EIF2B4Q9UI10 523 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 CNOT11Q9UKZ1 510 aaKnown RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 USP15Q9Y4E8 981 aaPredicted RBP5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 NEDD4P46934 1319 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 REV3LO60673 3130 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 CHD8Q9HCK8 2581 aa5.77□□□□□ -1.49
AMBRA1-209ENST00000529963 BAHCC1Q9P281 2608 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 ABHD14A-ACY1A0A1B0GW23 586 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 EPOPA6NHQ4 379 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 H3BML4 177 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 HIP1O00291 1037 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 SLC16A6O15403 523 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 TUSC2O75896 110 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 CXCL10P02778 98 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 AMHP03971 560 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 PARP1P09874 1014 aaKnown RBP5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 TYRP14679 529 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 ACRV1P26436 265 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 WDR5P61964 334 aaKnown RBP5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 NKX6-1P78426 367 aaPredicted RBP5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 QRICH1Q2TAL8 776 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 NRN1LQ496H8 165 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 NPNTQ6UXI9 565 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 C1orf210Q8IVY1 113 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 PPTC7Q8NI37 304 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 IL17DQ8TAD2 202 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 TBC1D15Q8TC07 691 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 ANKS1AQ92625 1134 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 KAT2BQ92831 832 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 TNPO1Q92973 898 aaKnown RBP5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 TAAR1Q96RJ0 339 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 CPVLQ9H3G5 476 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 MAN1C1Q9NR34 630 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 PNPOQ9NVS9 261 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 COL20A1Q9P218 1284 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 HDAC6Q9UBN7 1215 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 CTNNA3Q9UI47 895 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 PCDHA6Q9UN73 950 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 TANC1Q9C0D5 1861 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 SCN5AQ14524 2016 aa5.76□□□□□ -1.49
AMBRA1-209ENST00000529963 FAM186AA6NE01 2351 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 TPRP12270 2363 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 EMSYQ7Z589 1322 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 CCDC78A2IDD5 438 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 GOLGA6L6A8MZA4 724 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 SCAF4O95104 1147 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 MTHFD1P11586 935 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 CKBP12277 381 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 TRAF1Q13077 416 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 GALEQ14376 348 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 IMMTQ16891 758 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 KIAA0753Q2KHM9 967 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 SYCP2LQ5T4T6 812 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 UTP14CQ5TAP6 766 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 METRNLQ641Q3 311 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 DRICH1Q6PGQ1 229 aaPredicted RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 KCNV1Q6PIU1 500 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 CWC27Q6UX04 472 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 DAAM2Q86T65 1068 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 ENAHQ8N8S7 591 aaPredicted RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 CPT1CQ8TCG5 803 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 GDPD5Q8WTR4 605 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 TBC1D5Q92609 795 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 CDK5RAP3Q96JB5 506 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 FAM193BQ96PV7 902 aaPredicted RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 TGS1Q96RS0 853 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 CTAGE1Q96RT6 745 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 RAD9AQ99638 391 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 UBAC1Q9BSL1 405 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 PACSIN1Q9BY11 444 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 KRT23Q9C075 422 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 RWDD1Q9H446 243 aaPredicted RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 ZNF768Q9H5H4 540 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 JMJD4Q9H9V9 463 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 VAT1LQ9HCJ6 419 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 PXMP2Q9NR77 195 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 C1orf112Q9NSG2 853 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 MAP3K20Q9NYL2 800 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 FEZ2Q9UHY8 353 aaPredicted RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 TET1Q8NFU7 2136 aa5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 RIF1Q5UIP0 2472 aaKnown RBP5.75□□□□□ -1.49
AMBRA1-209ENST00000529963 BRWD1Q9NSI6 2320 aa5.74□□□□□ -1.49
AMBRA1-209ENST00000529963 HAS3O00219 553 aa5.74□□□□□ -1.49
AMBRA1-209ENST00000529963 LPXNO60711 386 aa5.74□□□□□ -1.49
AMBRA1-209ENST00000529963 NBNO60934 754 aa5.74□□□□□ -1.49
AMBRA1-209ENST00000529963 PPFIA4O75335 1185 aa5.74□□□□□ -1.49
AMBRA1-209ENST00000529963 AGFG2O95081 481 aa5.74□□□□□ -1.49
AMBRA1-209ENST00000529963 GJB5O95377 273 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms