RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 CREMQ03060 361 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 HSPA14Q0VDF9 509 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 RIPK1Q13546 671 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 TUBB2AQ13885 445 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 RAB39AQ14964 217 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 WDR43Q15061 677 aaKnown RBP eCLIP4.25□□□□□ -1.73
CTR9-205ENST00000529898 PPP2R5BQ15173 497 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 LONRF1Q17RB8 773 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 GEN1Q17RS7 908 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 PROSER3Q2NL68 480 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 CCDC93Q567U6 631 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 BEND6Q5SZJ8 279 aaPredicted RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 C10orf76Q5T2E6 689 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SYDE2Q5VT97 1194 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 PDXDC1Q6P996 788 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 VWA1Q6PCB0 445 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 FIP1L1Q6UN15 594 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 CWC27Q6UX04 472 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 C3orf62Q6ZUJ4 267 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 CCDC121Q6ZUS5 278 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 BZW1Q7L1Q6 419 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 SRGAP1Q7Z6B7 1085 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 GRAMD2AQ8IUY3 354 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 RHOT1Q8IXI2 618 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 CHPFQ8IZ52 775 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SYCP3Q8IZU3 236 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SPARTQ8N0X7 666 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 PPM1NQ8N819 430 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SCAIQ8N9R8 606 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SPERTQ8NA61 448 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 CFAP61Q8NHU2 1237 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 DEPTORQ8TB45 409 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 TBC1D15Q8TC07 691 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SPATA18Q8TC71 538 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 MAIP1Q8WWC4 291 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 HDAC10Q969S8 669 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SKA1Q96BD8 255 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 NRBF2Q96F24 287 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 NR1H4Q96RI1 486 aaPredicted RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 TUBB2BQ9BVA1 445 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 FUT8Q9BYC5 575 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 ABCG4Q9H172 646 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 SIL1Q9H173 461 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 TTC12Q9H892 705 aaPredicted RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 VIPAS39Q9H9C1 493 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 TDP1Q9NUW8 608 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 TYW1Q9NV66 732 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 SEPT11Q9NVA2 429 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 CTTNBP2NLQ9P2B4 639 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 WDR35Q9P2L0 1181 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 CTNNAL1Q9UBT7 734 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 DDX20Q9UHI6 824 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 ATPIF1Q9UII2 106 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 LIMCH1Q9UPQ0 1083 aa4.25□□□□□ -1.73
CTR9-205ENST00000529898 R3HDM2Q9Y2K5 976 aaKnown RBP4.25□□□□□ -1.73
CTR9-205ENST00000529898 NKTRP30414 1462 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 TTC41PQ6P2S7 1318 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 ARHGEF28Q8N1W1 1705 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 GPR75-ASB3A0A0A6YYF3 556 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 PRAMEF33A0A0G2JMD5 474 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 LRRD1A4D1F6 860 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 INO80B-WBP1J3KQ70 363 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 IFRD1O00458 451 aaPredicted RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 MGST3O14880 152 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 KIAA0391O15091 583 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 GRM6O15303 877 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 SULT1B1O43704 296 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 PRAMEF10O60809 474 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 ZC3H11AO75152 810 aaKnown RBP eCLIP4.24□□□□□ -1.73
CTR9-205ENST00000529898 TCEA3O75764 348 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 RNASEH2AO75792 299 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 FLOT1O75955 427 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 URI1O94763 535 aaPredicted RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 SBK3P0C264 359 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 RPS2P15880 293 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 ATF7P17544 494 aaPredicted RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 MLH1P40692 756 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 IARSP41252 1262 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 IL12RB1P42701 662 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 GNAQP50148 359 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 CCNG1P51959 295 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 SLC16A1P53985 500 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 POU6F2P78424 691 aaPredicted RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 TMF1P82094 1093 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 HNRNPA0Q13151 305 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 UBE4AQ14139 1066 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 SF3B3Q15393 1217 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 PPP1R7Q15435 360 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 MAPRE2Q15555 327 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 TPD52L1Q16890 204 aaPredicted RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 PLEKHO1Q53GL0 409 aaPredicted RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 MEX3CQ5U5Q3 659 aaKnown RBP4.24□□□□□ -1.73
CTR9-205ENST00000529898 PGM2L1Q6PCE3 622 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 MIGA2Q7L4E1 593 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 DGLUCYQ7Z3D6 616 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 PHLDB2Q86SQ0 1253 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 ZNF554Q86TJ5 538 aa4.24□□□□□ -1.73
CTR9-205ENST00000529898 WDR75Q8IWA0 830 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms