RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PHLDB2Q86SQ0 1253 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 KCNV2Q8TDN2 545 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 RNF34Q969K3 372 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 FAM122AQ96E09 287 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 ADAM33Q9BZ11 813 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 FAM86C1Q9NVL1 165 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 POLR3BQ9NW08 1133 aaPredicted RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 TMEM51Q9NW97 253 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 COX16Q9P0S2 106 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 CALCOCO1Q9P1Z2 691 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 XPO7Q9UIA9 1087 aaKnown RBP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 CLEC4EQ9ULY5 219 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 STARD13Q9Y3M8 1113 aa13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC90B-216ENST00000529856 MYO18AQ92614 2054 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 PRRT4C9JH25 899 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 TBL1XO60907 577 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 GYPCP04921 128 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 ABCB4P21439 1286 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 HOXA6P31267 233 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 TIE1P35590 1138 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 PLA2G5P39877 138 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 NBL1P41271 181 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 CXCR3P49682 368 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 SULT1E1P49888 294 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 SGSHP51688 502 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 NRLP54845 237 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 HSF5Q4G112 596 aaPredicted RBP13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 MS4A13Q5J8X5 152 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 C10orf76Q5T2E6 689 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 RNF43Q68DV7 783 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 PPP1R2P3Q6NXS1 205 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 MON1BQ7L1V2 547 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 BNIPLQ7Z465 357 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 MCOLN2Q8IZK6 566 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 ACDQ96AP0 544 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 MYEOVQ96EZ4 313 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 VCPIP1Q96JH7 1222 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 TBCBQ99426 244 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 METTL5Q9NRN9 209 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 PIGVQ9NUD9 493 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 ZSCAN32Q9NX65 697 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 TAS2R14Q9NYV8 317 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 HCN2Q9UL51 889 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 MMP17Q9ULZ9 603 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 SLC8A2Q9UPR5 921 aa13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 LUC7L2Q9Y383 392 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 BZW2Q9Y6E2 419 aaKnown RBP13.14□□□□□ -0.31
CCDC90B-216ENST00000529856 TCRBV5S1A1TA0A578 114 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 SIGLEC16A6NMB1 481 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 DDX3XO00571 662 aaKnown RBP eCLIP13.13□□□□□ -0.312e-15■■■■■ 36.8
CCDC90B-216ENST00000529856 ENDOD1O94919 500 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 GJB6O95452 261 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 KRT3P12035 628 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 GZMAP12544 262 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 TACR2P21452 398 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 HOXC13P31276 330 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 CASP14P31944 242 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 DEUP1Q05D60 604 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 MTA1Q13330 715 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 DMC1Q14565 340 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 GEN1Q17RS7 908 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 RAP1GAP2Q684P5 730 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 SPECC1LQ69YQ0 1117 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 SND1Q7KZF4 910 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 CCDC33Q8N5R6 958 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 ALLCQ8N6M5 410 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 EMC1Q8N766 993 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 IL17RCQ8NAC3 791 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 HJURPQ8NCD3 748 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 ZBTB44Q8NCP5 570 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 C3orf20Q8ND61 904 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 JOSD2Q8TAC2 188 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 RXFP2Q8WXD0 754 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 CFAP57Q96MR6 1250 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 PRICKLE1Q96MT3 831 aaPredicted RBP13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 PRMT1Q99873 361 aaKnown RBP13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 WDCPQ9H6R7 721 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 PCDHGA2Q9Y5H1 932 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
CCDC90B-216ENST00000529856 C2CD4BA6NLJ0 364 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 PROB1E7EW31 1015 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 SGK1O00141 431 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 LILRB5O75023 590 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 ADAM23O75077 832 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 KLF8O95600 359 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 ADCY5O95622 1261 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 SERPING1P05155 500 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 PDGFRAP16234 1089 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 RFC1P35251 1148 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 RPS24P62847 133 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 DMWDQ09019 674 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 CRY1Q16526 586 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 CCDC14Q49A88 953 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms