RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PABPC3Q9H361 631 aaKnown RBP12.18□□□□□ -0.46
AMBRA1-207ENST00000529553 EBF2Q9HAK2 575 aa12.18□□□□□ -0.46
AMBRA1-207ENST00000529553 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
AMBRA1-207ENST00000529553 FRMD3A2A2Y4 597 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 MDM4O15151 490 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 CYP26A1O43174 497 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 MAGEC1O60732 1142 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 MPOP05164 745 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 ATP5BP06576 529 aaKnown RBP12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 DLATP10515 647 aaKnown RBP12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 ZNF445P59923 1031 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 MYL6P60660 151 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 GABREP78334 506 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 SKOR1P84550 965 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 OVGP1Q12889 678 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 SNRNP35Q16560 246 aaKnown RBP12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 MPPE1Q53F39 396 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 NCEH1Q6PIU2 408 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 STXBP4Q6ZWJ1 553 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 ACOT1Q86TX2 421 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 IQCHQ86VS3 1027 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 MFSD2AQ8NA29 543 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 SLC2A14Q8TDB8 520 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 GRAMD1AQ96CP6 724 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 CGRRF1Q99675 332 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 ASCL3Q9NQ33 180 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 FBXL12Q9NXK8 326 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 HSPBP1Q9NZL4 362 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 NAGPAQ9UK23 515 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 NUDT5Q9UKK9 219 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 FZD4Q9ULV1 537 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 PCDHB1Q9Y5F3 818 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 COL12A1Q99715 3063 aa12.17□□□□□ -0.46
AMBRA1-207ENST00000529553 FAM47DPA6NHR8 397 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 LZTS3O60299 673 aaPredicted RBP12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 OPA1O60313 960 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 RNASEH1O60930 286 aaKnown RBP12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 USP12O75317 370 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 AFPP02771 609 aaKnown RBP12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 DLDP09622 509 aaKnown RBP12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 FAM200BP0CF97 657 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 HLA-FP30511 346 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 INHBCP55103 352 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 ARL13BQ3SXY8 428 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 SCD5Q86SK9 330 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 ADIPOR2Q86V24 386 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 UNC93AQ86WB7 457 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 DENND1CQ8IV53 801 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 AHI1Q8N157 1196 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 GANCQ8TET4 914 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 SERAC1Q96JX3 654 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 NEUROG2Q9H2A3 272 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 SMYD3Q9H7B4 428 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 PANK4Q9NVE7 773 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 TMEM131Q92545 1883 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 CKAP5Q14008 2032 aa12.16□□□□□ -0.46
AMBRA1-207ENST00000529553 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 WNT9AO14904 365 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 SUV39H1O43463 412 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 SIGLEC6O43699 453 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 GP1BAP07359 652 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 SFTPCP11686 197 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 GP1BBP13224 206 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 P4HA1P13674 534 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 CCDC130P13994 396 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 IDEP14735 1019 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 NUDT1P36639 197 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 KIF11P52732 1056 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 AP3M2P53677 418 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 SNRPFP62306 86 aaKnown RBP12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 CYP24A1Q07973 514 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 NFATC3Q12968 1075 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 KCNJ12Q14500 433 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 ARID5BQ14865 1188 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 HS1BP3Q53T59 392 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 SGO2Q562F6 1265 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 ZNF667Q5HYK9 610 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 CCDC81Q6ZN84 652 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 CHST9Q7L1S5 443 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 GPRIN1Q7Z2K8 1008 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 EXD3Q8N9H8 876 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 CYB5D2Q8WUJ1 264 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 ZNF516Q92618 1163 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 SLC46A1Q96NT5 459 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 IRX2Q9BZI1 471 aaPredicted RBP12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 STARD5Q9NSY2 213 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 ANKMY1Q9P2S6 941 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 SEPT3Q9UH03 358 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 STRIP2Q9ULQ0 834 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 TEX15Q9BXT5 2789 aa12.15□□□□□ -0.46
AMBRA1-207ENST00000529553 TRIM38O00635 465 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 LATO43561 262 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 STX6O43752 255 aa12.14□□□□□ -0.47
AMBRA1-207ENST00000529553 PHACTR2O75167 634 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms