RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MID1IP1Q9NPA3 183 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ACP6Q9NPH0 428 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TMCC3Q9ULS5 477 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 MAP2P11137 1827 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 DEPDC5O75140 1603 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 IQGAP1P46940 1657 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 E5RJQ4 531 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SMIM22K7EJ46 135 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 WNT10BO00744 389 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RAMP2O60895 175 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 VCLP18206 1134 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 CCT8P50990 548 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 BEX3Q00994 111 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 FAAP100Q0VG06 881 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 CDH17Q12864 832 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 MAP1SQ66K74 1059 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF470Q6ECI4 717 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RD3Q7Z3Z2 195 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 KRT78Q8N1N4 520 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RNF148Q8N7C7 305 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 POU5F2Q8N7G0 328 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 SLC35C1Q96A29 364 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TADA1Q96BN2 335 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 NMD3Q96D46 503 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 FAM120BQ96EK7 910 aaKnown RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 MTG1Q9BT17 334 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TCF7L2Q9NQB0 619 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 CHST7Q9NS84 486 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 LRRC4BQ9NT99 713 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 ARMCX1Q9P291 453 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 PDP2Q9P2J9 529 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 TRPC4Q9UBN4 977 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 RPS6KB2Q9UBS0 482 aa8.32□□□□□ -1.08
CTNND1-220ENST00000529526 FRMPD4Q14CM0 1322 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 ATP9AO75110 1047 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 VAPBO95292 243 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 BDNFP23560 247 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 GRK2P25098 689 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 MIPP30301 263 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 FMO4P31512 558 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 ABCG1P45844 678 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 BOP1Q14137 746 aaKnown RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 TMC7Q7Z402 723 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 GLT6D1Q7Z4J2 308 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 DTNBP1Q96EV8 351 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 TMEM79Q9BSE2 394 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 NAT9Q9BTE0 207 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 DNAJC18Q9H819 358 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 ATP13A1Q9HD20 1204 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 KRCC1Q9NPI7 259 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 MPP6Q9NZW5 540 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SPACA6W5XKT8 324 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 F8VP50 259 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 YBX3P16989 372 aaKnown RBP eCLIP8.31□□□□□ -1.089e-12■□□□□ 9.1
CTNND1-220ENST00000529526 MAPK9P45984 424 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CASP5P51878 434 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 PLK1P53350 603 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CASP7P55210 303 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 KPNB1Q14974 876 aaKnown RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 NT5DC1Q5TFE4 455 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 ATG16L2Q8NAA4 619 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 MTERF3Q96E29 417 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 APOPT1Q96IL0 206 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 DNAJC5Q9H3Z4 198 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SH3BP4Q9P0V3 963 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 LNPEPQ9UIQ6 1025 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CASZ1Q86V15 1759 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 NKRFO15226 690 aaKnown RBP eCLIP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SYNCRIPO60506 623 aaKnown RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 TGFB2P61812 414 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 YWHAZP63104 245 aaKnown RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SLC6A3Q01959 620 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CRYMQ14894 314 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SPANXN3Q5MJ09 141 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 NECAB2Q7Z6G3 386 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 FNDC5Q8NAU1 212 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SLC16A10Q8TF71 515 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 LRRN4Q8WUT4 740 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 KAT5Q92993 513 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 OXNAD1Q96HP4 312 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 TPD52L3Q96J77 140 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CPNE1Q99829 537 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 AGXT2Q9BYV1 514 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 SENP6Q9GZR1 1112 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 TKTL2Q9H0I9 626 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 MIEF1Q9NQG6 463 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 PLA2G4CQ9UP65 541 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 NCAM2O15394 837 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 CYP7B1O75881 506 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 RBL1P28749 1068 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 GRK3P35626 688 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 MYBPC2Q14324 1141 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 ZBTB49Q6ZSB9 765 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 ZSCAN18Q8TBC5 510 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 TRPC4APQ8TEL6 797 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 TLR10Q9BXR5 811 aa8.31□□□□□ -1.08
CTNND1-220ENST00000529526 GLIS2Q9BZE0 524 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-220ENST00000529526 MYLK2Q9H1R3 596 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms