RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 A0A1B0GVM2 712 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 TCAF2A6NFQ2 919 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 NCAM2O15394 837 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 TIMM44O43615 452 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 LRCH4O75427 683 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 PAGE1O75459 146 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 ZRANB2O95218 330 aaKnown RBP eCLIP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 LUC7L3O95232 432 aaKnown RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 TBX18O95935 607 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 MOCS2O96007 188 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 HMBSP08397 361 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 IRF1P10914 325 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 SRFP11831 508 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 CTNNA2P26232 953 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 MIPP30301 263 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 MAPKAPK2P49137 400 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 HDAC4P56524 1084 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 TUBB2AQ13885 445 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 DMC1Q14565 340 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 RPS6KA1Q15418 735 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 DPYSL2Q16555 572 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 C15orf59Q2T9L4 293 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 ZC3H12AQ5D1E8 599 aaKnown RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 SEL1L2Q5TEA6 688 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 CHST9Q7L1S5 443 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 RALGPS2Q86X27 583 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 CHSY1Q86X52 802 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 KATNAL2Q8IYT4 538 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 EXD1Q8NHP7 514 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 WFIKKN2Q8TEU8 576 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 DDI1Q8WTU0 396 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 TBC1D31Q96DN5 1066 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 PIWIL1Q96J94 861 aaKnown RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 RPRD1AQ96P16 312 aaPredicted RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 MYADMQ96S97 322 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 NELL2Q99435 816 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 ZNF670Q9BS34 389 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 TUBB2BQ9BVA1 445 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 ZYG11BQ9C0D3 744 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 KCNK12Q9HB15 430 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 OSGEPQ9NPF4 335 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 SLC2A4RGQ9NR83 387 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 SPHK2Q9NRA0 654 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 HOMER3Q9NSC5 361 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 MARK1Q9P0L2 795 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 NUDT5Q9UKK9 219 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 AGO1Q9UL18 857 aaKnown RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 HPCAL4Q9UM19 191 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 AP4E1Q9UPM8 1137 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 REXO2Q9Y3B8 237 aaKnown RBP8.2□□□□□ -1.1
SSBP3-211ENST00000528787 ALG6Q9Y672 507 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 NUMBLQ9Y6R0 609 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 CDH23Q9H251 3354 aa8.2□□□□□ -1.1
SSBP3-211ENST00000528787 ZSCAN5CA6NGD5 496 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TMEM110-MUSTN1A8MSY1 372 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 C2CD4DB7Z1M9 353 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 EEF2KO00418 725 aaKnown RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 CES2O00748 559 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 HOXC11O43248 304 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 MSI1O43347 362 aaKnown RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 BUB1O43683 1085 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 PALMO75781 387 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TJP3O95049 919 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 ALADP13716 330 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 RHOQP17081 205 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TCP1P17987 556 aaKnown RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 MX2P20592 715 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TACR2P21452 398 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 COMTP21964 271 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 GDI1P31150 447 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 CTNNA1P35221 906 aaKnown RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 NNMTP40261 264 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 CDH4P55283 916 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TPI1P60174 286 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 PRKCQQ04759 706 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 ZP2Q05996 745 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 SULT2A1Q06520 285 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 CDH18Q13634 790 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 RUNX3Q13761 415 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 C5orf22Q49AR2 442 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TFDP3Q5H9I0 405 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 MS4A13Q5J8X5 152 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 STXBP5Q5T5C0 1151 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 VITQ6UXI7 678 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 Q6ZNB5 142 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 PHLDB2Q86SQ0 1253 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 ZSCAN30Q86W11 494 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 FAM131BQ86XD5 332 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TTC13Q8NBP0 860 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 TTC16Q8NEE8 873 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 ADAM32Q8TC27 787 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 KCNV2Q8TDN2 545 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 UCMAQ8WVF2 138 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 HAUS1Q96CS2 278 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 ZFRQ96KR1 1074 aaKnown RBP8.19□□□□□ -1.1
SSBP3-211ENST00000528787 ZSWIM3Q96MP5 696 aa8.19□□□□□ -1.1
SSBP3-211ENST00000528787 SLC22A12Q96S37 553 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms