RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C11orf57Q6ZUT1 292 aaPredicted RBP9.98□□□□□ -0.81
CHD7-208ENST00000528280 TOGARAM2Q6ZUX3 1019 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 RABEPKQ7Z6M1 372 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 SFTPA1Q8IWL2 248 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 FAM71AQ8IYT1 594 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 AHI1Q8N157 1196 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 ATP6V0D2Q8N8Y2 350 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 TMEM35BQ8NCS4 154 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 MSANTD4Q8NCY6 345 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 C1orf131Q8NDD1 294 aaKnown RBP9.98□□□□□ -0.81
CHD7-208ENST00000528280 CEP76Q8TAP6 659 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 STK33Q9BYT3 514 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 NAT10Q9H0A0 1025 aaKnown RBP9.98□□□□□ -0.81
CHD7-208ENST00000528280 SYNCQ9H7C4 482 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 FBRSQ9HAH7 460 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 PLCB1Q9NQ66 1216 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 SUN2Q9UH99 717 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 NAALADL1Q9UQQ1 740 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
CHD7-208ENST00000528280 E5RJQ4 531 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 DCLK1O15075 740 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 PAPSS1O43252 624 aaPredicted RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 TSPAN3O60637 253 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 HSF2BPO75031 334 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 NDUFS2O75306 463 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 MOCS3O95396 460 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 FYNP06241 537 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 GABRG2P18507 467 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 POLR2EP19388 210 aaKnown RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 HOXC13P31276 330 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 CLCN1P35523 988 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 DHPSP49366 369 aaPredicted RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 SFSWAPQ12872 951 aaKnown RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 PDCLQ13371 301 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 DRAP1Q14919 205 aaPredicted RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 GEN1Q17RS7 908 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 MAP7D1Q3KQU3 841 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 MIIPQ5JXC2 388 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 SYCP2LQ5T4T6 812 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 IL31Q6EBC2 164 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 CYP2U1Q7Z449 544 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 KIAA0907Q7Z7F0 614 aaPredicted RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 ZNF677Q86XU0 584 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 WDTC1Q8N5D0 677 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.97□□□□□ -0.81
CHD7-208ENST00000528280 HJURPQ8NCD3 748 aaPredicted RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 FIBINQ8TAL6 211 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 DQX1Q8TE96 717 aaKnown RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 CLEC4CQ8WTT0 213 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 SLC39A13Q96H72 371 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 BTN2A3PQ96KV6 586 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 CIPCQ9C0C6 399 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 PRDM16Q9HAZ2 1276 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 SIX2Q9NPC8 291 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 SAMSN1Q9NSI8 373 aaKnown RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 TJP2Q9UDY2 1190 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 INVSQ9Y283 1065 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 PAXBP1Q9Y5B6 917 aa9.97□□□□□ -0.81
CHD7-208ENST00000528280 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.97□□□□□ -0.81
CHD7-208ENST00000528280 FLNBO75369 2602 aaKnown RBP9.96□□□□□ -0.81
CHD7-208ENST00000528280 MYO18AQ92614 2054 aaKnown RBP9.96□□□□□ -0.81
CHD7-208ENST00000528280 LRRC10BA6NIK2 292 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 MSI1O43347 362 aaKnown RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 TBL1XO60907 577 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 LSM8O95777 96 aaKnown RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 TRUB2O95900 331 aaKnown RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 F9P00740 461 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 CALCAP01258 141 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 ASLP04424 464 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 ACADMP11310 421 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 UCHL3P15374 230 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 CDK11BP21127 795 aaKnown RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 ABCB4P21439 1286 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 HOXD9P28356 352 aaPredicted RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 CCR1P32246 355 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 NOS2P35228 1153 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 SCNN1AP37088 669 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 WASP42768 502 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 ST8SIA6P61647 398 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 SLC6A3Q01959 620 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 KCNMA1Q12791 1236 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 LMAN2Q12907 356 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 SLC12A1Q13621 1099 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 RAPGEF1Q13905 1077 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 ZNF234Q14588 700 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 STX1AQ16623 288 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 CCDC183Q5T5S1 534 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 TTC39BQ5VTQ0 682 aaPredicted RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 SYPL2Q5VXT5 272 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 OR6B2Q6IFH4 312 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 SERPINA13PQ6UXR4 307 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 SND1Q7KZF4 910 aaKnown RBP eCLIP9.96□□□□□ -0.82
CHD7-208ENST00000528280 SLC47A2Q86VL8 602 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 SYT12Q8IV01 421 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 KDM1BQ8NB78 822 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 GPT2Q8TD30 523 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 PRCCQ92733 491 aaPredicted RBP9.96□□□□□ -0.82
CHD7-208ENST00000528280 FOXJ1Q92949 421 aa9.96□□□□□ -0.82
CHD7-208ENST00000528280 RNF34Q969K3 372 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms