RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
SDHD-205ENST00000528048 SLC2A13Q96QE2 648 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 HHIPQ96QV1 700 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 NUP58Q9BVL2 599 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 C2orf42Q9NWW7 574 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 STIM2Q9P246 746 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 NOCTQ9UK39 431 aaKnown RBP12.58□□□□□ -0.4
SDHD-205ENST00000528048 FBXO10Q9UK96 956 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 MMP17Q9ULZ9 603 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 SLC27A6Q9Y2P4 619 aa12.58□□□□□ -0.4
SDHD-205ENST00000528048 GOLGA6L7A0A1B0GV03 622 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 M0QYT0 321 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 NPC1O15118 1278 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 TBL1XO60907 577 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 LILRB5O75023 590 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 DAB1O75553 588 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 TDGF1P13385 188 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 NTSR1P30989 418 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 SCNN1AP37088 669 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 KIR2DL1P43626 348 aaPredicted RBP12.57□□□□□ -0.4
SDHD-205ENST00000528048 NOMO3P69849 1222 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 MESP2Q0VG99 397 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 NR1I3Q14994 352 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 CRY1Q16526 586 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 MPP7Q5T2T1 576 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 PIK3R6Q5UE93 754 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 ANKS1BQ7Z6G8 1248 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 XYLT1Q86Y38 959 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 PHTF2Q8N3S3 785 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 IL17RCQ8NAC3 791 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 HJURPQ8NCD3 748 aaPredicted RBP12.57□□□□□ -0.4
SDHD-205ENST00000528048 AGPAT1Q99943 283 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 EDEM3Q9BZQ6 932 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 CIPCQ9C0C6 399 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 POLR3BQ9NW08 1133 aaPredicted RBP12.57□□□□□ -0.4
SDHD-205ENST00000528048 ADAM22Q9P0K1 906 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 BCCIPQ9P287 314 aaKnown RBP eCLIP12.57□□□□□ -0.4
SDHD-205ENST00000528048 PLA2G4CQ9UP65 541 aa12.57□□□□□ -0.4
SDHD-205ENST00000528048 FAM170AA1A519 330 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 PRR23AA6NEV1 266 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 KCNU1A8MYU2 1149 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 F5H5T6 163 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
SDHD-205ENST00000528048 CHRNB2P17787 502 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 SULT1E1P49888 294 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 FMO1Q01740 532 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 DMWDQ09019 674 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 BYSLQ13895 437 aaKnown RBP12.56□□□□□ -0.4
SDHD-205ENST00000528048 EIF4HQ15056 248 aaKnown RBP12.56□□□□□ -0.4
SDHD-205ENST00000528048 ASIC2Q16515 512 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 CLEC16AQ2KHT3 1053 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 USP39Q53GS9 565 aaKnown RBP12.56□□□□□ -0.4
SDHD-205ENST00000528048 SFMBT2Q5VUG0 894 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 ANO7Q6IWH7 933 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 PPP1R2P3Q6NXS1 205 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 RFWD3Q6PCD5 774 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 MMS22LQ6ZRQ5 1243 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 CHSY1Q86X52 802 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 SFTPA1Q8IWL2 248 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 LGI2Q8N0V4 545 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 SLC30A5Q8TAD4 765 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 WFIKKN2Q8TEU8 576 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 PIWIL1Q96J94 861 aaKnown RBP12.56□□□□□ -0.4
SDHD-205ENST00000528048 NUCKS1Q9H1E3 243 aaKnown RBP12.56□□□□□ -0.4
SDHD-205ENST00000528048 WDCPQ9H6R7 721 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 NCDNQ9UBB6 729 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 EBF1Q9UH73 591 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 GMEB2Q9UKD1 530 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 TRIOO75962 3097 aa12.56□□□□□ -0.4
SDHD-205ENST00000528048 COL4A3Q01955 1670 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 ANKRD62A6NC57 917 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 PRRT4C9JH25 899 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 H0Y626 953 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 SGK1O00141 431 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 GFRA2O00451 464 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 HRO43593 1189 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 RPP40O75818 363 aaKnown RBP12.55□□□□□ -0.4
SDHD-205ENST00000528048 MOCS3O95396 460 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 IGLV3-25P01717 112 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 CALB1P05937 261 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 ATP5BP06576 529 aaKnown RBP12.55□□□□□ -0.4
SDHD-205ENST00000528048 HOXB2P14652 356 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 DESP17661 470 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 POLR2EP19388 210 aaKnown RBP12.55□□□□□ -0.4
SDHD-205ENST00000528048 TACR2P21452 398 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 MMP8P22894 467 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 HOXD9P28356 352 aaPredicted RBP12.55□□□□□ -0.4
SDHD-205ENST00000528048 SLC6A4P31645 630 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 WASP42768 502 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 DEUP1Q05D60 604 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 DSG2Q14126 1118 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 STARD3Q14849 445 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 NFKBIBQ15653 356 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 SLC25A52Q3SY17 297 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
SDHD-205ENST00000528048 FAM133BQ5BKY9 247 aaKnown RBP12.55□□□□□ -0.4
SDHD-205ENST00000528048 MS4A13Q5J8X5 152 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms