RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 GRK6P43250 576 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 GRIA4P48058 902 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 KRT85P78386 507 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 BST2Q10589 180 aaKnown RBP16.43■□□□□ 0.22
CTTN-212ENST00000527962 TMEM215Q68D42 235 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 C19orf48Q6RUI8 117 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 CCDC117Q8IWD4 279 aaPredicted RBP16.43■□□□□ 0.22
CTTN-212ENST00000527962 UNC45BQ8IWX7 931 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 RBBP8NLQ8NC74 664 aaPredicted RBP16.43■□□□□ 0.22
CTTN-212ENST00000527962 C1orf216Q8TAB5 229 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 P2RY11Q96G91 374 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 ULBP1Q9BZM6 244 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 TMEM245Q9H330 911 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 SGK2Q9HBY8 427 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 ABCB8Q9NUT2 735 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 GGA2Q9UJY4 613 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 STOML2Q9UJZ1 356 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 SCML1Q9UN30 329 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 HPSEQ9Y251 543 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 ANKRD6Q9Y2G4 727 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 CEP192Q8TEP8 1941 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 ADAMTS9Q9P2N4 1935 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 ITPR1Q14643 2758 aa16.43■□□□□ 0.22
CTTN-212ENST00000527962 MYH10P35580 1976 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 TYW5A2RUC4 315 aaKnown RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 TSPAN3O60637 253 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 RNASEH1O60930 286 aaKnown RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 PABPC1P11940 636 aaKnown RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 HLA-EP13747 358 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 POLR2EP19388 210 aaKnown RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 CD27P26842 260 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 HLA-FP30511 346 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 ACSL1P33121 698 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 SLC11A2P49281 568 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 CCT8P50990 548 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 MCCD1P59942 119 aaPredicted RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 ST8SIA6P61647 398 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 DPYDQ12882 1025 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 KIF19Q2TAC6 998 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 GOLGA7BQ2TAP0 167 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 MPP7Q5T2T1 576 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 BSPRYQ5W0U4 402 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 BAHD1Q8TBE0 780 aaPredicted RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 GANCQ8TET4 914 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 IGSF8Q969P0 613 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 DDX50Q9BQ39 737 aaKnown RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 C6orf106Q9H6K1 298 aaPredicted RBP16.42■□□□□ 0.22
CTTN-212ENST00000527962 DKK4Q9UBT3 224 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 TSPAN16Q9UKR8 245 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 FREM2Q5SZK8 3169 aa16.42■□□□□ 0.22
CTTN-212ENST00000527962 GOLGA8CPA6NN73 597 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 IRAK2O43187 625 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 PCDHGA12O60330 932 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 FSBPO95073 299 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 ATXN1LP0C7T5 689 aaKnown RBP16.41■□□□□ 0.22
CTTN-212ENST00000527962 SETSIPP0DME0 302 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 CD19P15391 556 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 C21orf59P57076 290 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 BNC1Q01954 994 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 TCERG1LQ5VWI1 586 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 NUGGCQ68CJ6 796 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 MBLAC2Q68D91 279 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 ZNF776Q68DI1 518 aaPredicted RBP16.41■□□□□ 0.22
CTTN-212ENST00000527962 PDZD3Q86UT5 571 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.41■□□□□ 0.22
CTTN-212ENST00000527962 MDM1Q8TC05 714 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 CYB5D2Q8WUJ1 264 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 EDEM1Q92611 657 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 SEMA4DQ92854 862 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 TM9SF3Q9HD45 589 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 CNGB3Q9NQW8 809 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 ATP6V1DQ9Y5K8 247 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 SNX11Q9Y5W9 270 aa16.41■□□□□ 0.22
CTTN-212ENST00000527962 EIF4E1BA6NMX2 242 aaKnown RBP16.4■□□□□ 0.22
CTTN-212ENST00000527962 C7P10643 843 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 VDRP11473 427 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 NDUFA8P51970 172 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 ADIGQ0VDE8 80 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 CUL2Q13617 745 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 COL28A1Q2UY09 1125 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 KRBA2Q6ZNG9 492 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 USP30Q70CQ3 517 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 ADIPOR2Q86V24 386 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 SCML4Q8N228 414 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 KCTD13Q8WZ19 329 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 BIRC7Q96CA5 298 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 TSG101Q99816 390 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 ACE2Q9BYF1 805 aaPredicted RBP16.4■□□□□ 0.22
CTTN-212ENST00000527962 SCUBE2Q9NQ36 999 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 PRSS16Q9NQE7 514 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 SFMBT1Q9UHJ3 866 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTTN-212ENST00000527962 WDFY3Q8IZQ1 3526 aa16.4■□□□□ 0.22
CTTN-212ENST00000527962 NBEAQ8NFP9 2946 aa16.39■□□□□ 0.21
CTTN-212ENST00000527962 FAM237AA0A1B0GTK4 181 aa16.39■□□□□ 0.21
CTTN-212ENST00000527962 DKK1O94907 266 aa16.39■□□□□ 0.21
CTTN-212ENST00000527962 CDK4P11802 303 aa16.39■□□□□ 0.21
CTTN-212ENST00000527962 TBXAS1P24557 533 aaPredicted RBP16.39■□□□□ 0.21
CTTN-212ENST00000527962 RPS14P62263 151 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms