RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZDHHC17Q8IUH5 632 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 PGBD3Q8N328 593 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 HJURPQ8NCD3 748 aaPredicted RBP34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 TMEM35BQ8NCS4 154 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 ADAM32Q8TC27 787 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 GANQ9H2C0 597 aa34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 LIMA1Q9UHB6 759 aaKnown RBP34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 DYNC1LI1Q9Y6G9 523 aaKnown RBP34.31■■■■□ 3.08
SSSCA1-205ENST00000527920 CDK17Q00537 523 aa34.3■■■■□ 3.08
SSSCA1-205ENST00000527920 STARD3Q14849 445 aa34.3■■■■□ 3.08
SSSCA1-205ENST00000527920 DCAF6Q58WW2 860 aa34.3■■■■□ 3.08
SSSCA1-205ENST00000527920 TMEM215Q68D42 235 aa34.3■■■■□ 3.08
SSSCA1-205ENST00000527920 ZNF397Q8NF99 534 aaPredicted RBP34.3■■■■□ 3.08
SSSCA1-205ENST00000527920 VPS45Q9NRW7 570 aa34.3■■■■□ 3.08
SSSCA1-205ENST00000527920 CALCOCO1Q9P1Z2 691 aa34.3■■■■□ 3.08
SSSCA1-205ENST00000527920 GOLGA6L7A0A1B0GV03 622 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 BCLAF3A2AJT9 711 aaKnown RBP34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 LRRC10BA6NIK2 292 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 LSM8O95777 96 aaKnown RBP34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 ERBB2P04626 1255 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 NDUFV2P19404 249 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 SGSHP51688 502 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 FAM183BPQ6ZVS7 135 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 NETO1Q8TDF5 533 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 RLN3Q8WXF3 142 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 DDX1Q92499 740 aaKnown RBP34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 BTN2A3PQ96KV6 586 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 PRICKLE1Q96MT3 831 aaPredicted RBP34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 CIPCQ9C0C6 399 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 SYNCQ9H7C4 482 aa34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 SLTMQ9NWH9 1034 aaKnown RBP eCLIP34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 CDV3Q9UKY7 258 aaKnown RBP34.29■■■■□ 3.08
SSSCA1-205ENST00000527920 TYW5A2RUC4 315 aaKnown RBP34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 ZNF217O75362 1048 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 SLC2A3P11169 496 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 ZNF18P17022 549 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 IL12RB1P42701 662 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 ZNF234Q14588 700 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 MS4A13Q5J8X5 152 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 OR6B2Q6IFH4 312 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 DEFB106AQ8N104 65 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 AHI1Q8N157 1196 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 PDCL3Q9H2J4 239 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 ABCB8Q9NUT2 735 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 TMEM63CQ9P1W3 806 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 GGA2Q9UJY4 613 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 RAD54BQ9Y620 910 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 PLXND1Q9Y4D7 1925 aa34.28■■■■□ 3.08
SSSCA1-205ENST00000527920 WASH3PC4AMC7 463 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 TBL1XO60907 577 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 PABPC1P11940 636 aaKnown RBP34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 SCNN1AP37088 669 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 GABRB2P47870 512 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 COPB1P53618 953 aaKnown RBP34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 SLC6A3Q01959 620 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 MTA1Q13330 715 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 ZC3H12AQ5D1E8 599 aaKnown RBP34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 LPCAT2Q7L5N7 544 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 NUCKS1Q9H1E3 243 aaKnown RBP34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 MBD1Q9UIS9 605 aaPredicted RBP34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 SIK3Q9Y2K2 1263 aa34.27■■■■□ 3.08
SSSCA1-205ENST00000527920 LGALS16A8MUM7 142 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 DAB1O75553 588 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 PITX1P78337 314 aaPredicted RBP34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 FOXK2Q01167 660 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 TYRO3Q06418 890 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 NCAPHQ15003 741 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 SLC36A4Q6YBV0 504 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 ADIPOR2Q86V24 386 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 ZNF677Q86XU0 584 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 ABCA7Q8IZY2 2146 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 FIBINQ8TAL6 211 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 EPS8L1Q8TE68 723 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 MRGPRX1Q96LB2 322 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 FAM204AQ9H8W3 233 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 DDIT4Q9NX09 232 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 SLC12A6Q9UHW9 1150 aa34.26■■■■□ 3.08
SSSCA1-205ENST00000527920 RALGAPA1Q6GYQ0 2036 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 MOCS2O96007 188 aaPredicted RBP34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 CREB5Q02930 508 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 ARID5AQ03989 594 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 FUT11Q495W5 492 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 CHST9Q7L1S5 443 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 NOP9Q86U38 636 aaKnown RBP34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 METTL3Q86U44 580 aaKnown RBP34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 MFN1Q8IWA4 741 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 ATP6V0D2Q8N8Y2 350 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 C12orf50Q8NA57 414 aaPredicted RBP34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 NAT10Q9H0A0 1025 aaKnown RBP34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 FAM207AQ9NSI2 230 aaPredicted RBP34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 RRN3Q9NYV6 651 aa34.25■■■■□ 3.07
SSSCA1-205ENST00000527920 MAP3K13O43283 966 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 CAVIN2O95810 425 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 CCR1P32246 355 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 JAM2P57087 298 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 WFDC5Q8TCV5 224 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 LMLNQ96KR4 655 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 RTKNQ9BST9 563 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 HSD3B7Q9H2F3 369 aa34.24■■■■□ 3.07
SSSCA1-205ENST00000527920 TMEM51Q9NW97 253 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms