RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 CHST9Q7L1S5 443 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 BEND5Q7L4P6 421 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 PASD1Q8IV76 773 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 UNC45BQ8IWX7 931 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 GPT2Q8TD30 523 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 CYB5D2Q8WUJ1 264 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 GOLGA1Q92805 767 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 FAM149B1Q96BN6 582 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 CPXM1Q96SM3 734 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 EDEM2Q9BV94 578 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 CIPCQ9C0C6 399 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 NUP62CLQ9H1M0 184 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 NDST4Q9H3R1 872 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 ABCB8Q9NUT2 735 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 PILRBQ9UKJ0 227 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 ACACBO00763 2458 aa10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 ASCC3Q8N3C0 2202 aaKnown RBP10.85□□□□□ -0.67
PRPF40B-204ENST00000527253 CEP192Q8TEP8 1941 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 CKAP5Q14008 2032 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 TIMM44O43615 452 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 ZNF217O75362 1048 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 IGLV3-25P01717 112 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 PABPC1P11940 636 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC11A2P49281 568 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 RPS24P62847 133 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 ZNF33AQ06730 810 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 EIF4HQ15056 248 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 TPD52L1Q16890 204 aaPredicted RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 ZC3H12AQ5D1E8 599 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 SPDYCQ5MJ68 293 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 MPP7Q5T2T1 576 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 PEAR1Q5VY43 1037 aaPredicted RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 IL31Q6EBC2 164 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 KIAA1324Q6UXG2 1013 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC36A4Q6YBV0 504 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 METTL3Q86U44 580 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC47A2Q86VL8 602 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 SYT12Q8IV01 421 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 ZNF366Q8N895 744 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 UCMAQ8WVF2 138 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 FAM81BQ96LP2 452 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 SERPINB11Q96P15 392 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 SLC2A13Q96QE2 648 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 TUBGCP2Q9BSJ2 902 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 LSM14BQ9BX40 385 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 NUCKS1Q9H1E3 243 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 TMEM245Q9H330 911 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 MTG2Q9H4K7 406 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 PRDM16Q9HAZ2 1276 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 PLCB1Q9NQ66 1216 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 ITM2CQ9NQX7 267 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 STIM2Q9P246 746 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 USP36Q9P275 1121 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 EVLQ9UI08 416 aaPredicted RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 GGA2Q9UJY4 613 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 INTS6Q9UL03 887 aaKnown RBP10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 TLR6Q9Y2C9 796 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 CACNA1EQ15878 2313 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 NUMA1Q14980 2115 aa10.84□□□□□ -0.67
PRPF40B-204ENST00000527253 CHD8Q9HCK8 2581 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 MUC22E2RYF6 1773 aaPredicted RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 NPC1O15118 1278 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 IRAK2O43187 625 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 SART1O43290 800 aaKnown RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 AP5Z1O43299 807 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 GRAP2O75791 330 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 TRUB2O95900 331 aaKnown RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 MOCS2O96007 188 aaPredicted RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 ERBB2P04626 1255 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 EPHX1P07099 455 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 ADRB1P08588 477 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 PRKCSHP14314 528 aaPredicted RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 ZNF445P59923 1031 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 LMAN2Q12907 356 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 NNTQ13423 1086 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 KCNJ12Q14500 433 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 STARD3Q14849 445 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 DCAF6Q58WW2 860 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 TRIM61Q5EBN2 209 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 FSCBQ5H9T9 825 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 MS4A13Q5J8X5 152 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 KLHDC7AQ5VTJ3 777 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 MBLAC2Q68D91 279 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 MMS22LQ6ZRQ5 1243 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 TMPRSS6Q8IU80 811 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 FAM114A1Q8IWE2 563 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 FAM71AQ8IYT1 594 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 DEFB106AQ8N104 65 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 CFAP52Q8N1V2 620 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 FIBINQ8TAL6 211 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 WFIKKN2Q8TEU8 576 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 TTC17Q96AE7 1141 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 MYO19Q96H55 970 aa10.83□□□□□ -0.68
PRPF40B-204ENST00000527253 ZNF419Q96HQ0 510 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms