RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 FAM72CH0Y354 149 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 GCATO75600 419 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 ABHD2P08910 425 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 RFC2P35250 354 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 IFT88Q13099 833 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 SEMA3BQ13214 749 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 GPR17Q13304 367 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 PAFAH1B3Q15102 231 aaKnown RBP16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 PDK1Q15118 436 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 FAM72AQ5TYM5 149 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 FAM72DQ6L9T8 149 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 FAM72BQ86X60 149 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 SPPL2BQ8TCT7 592 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 SERPINB12Q96P63 405 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 MFHAS1Q9Y4C4 1052 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 TET1Q8NFU7 2136 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 PTPRDP23468 1912 aa16.73■□□□□ 0.27
SNRNP35-204ENST00000527158 PPP1R12AO14974 1030 aaPredicted RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 MFSD11O43934 449 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 IGLV3-25P01717 112 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 CLTBP09497 229 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 ERCC2P18074 760 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 STAT4Q14765 748 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 LONRF1Q17RB8 773 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 LACTB2Q53H82 288 aaPredicted RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 BRMS1LQ5PSV4 323 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 RTP2Q5QGT7 225 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 SDHAF4Q5VUM1 108 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 SCD5Q86SK9 330 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 CCDC33Q8N5R6 958 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 CCDC110Q8TBZ0 833 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 LRRN4Q8WUT4 740 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 HTR3CQ8WXA8 447 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 CHMP6Q96FZ7 201 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 SMOC2Q9H3U7 446 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 SCN5AQ14524 2016 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 A0A1W2PQH9 124 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 TCRBV7S3A2A0A539 114 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 I6L893 689 aaPredicted RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 DCLK1O15075 740 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 IRAK2O43187 625 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 TCEA3O75764 348 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 ZNF189O75820 626 aaPredicted RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 STK10O94804 968 aaKnown RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 TMEM63AO94886 807 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 GPR15P49685 360 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 KCNJ11Q14654 390 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 HP1BP3Q5SSJ5 553 aaPredicted RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 CPLX4Q7Z7G2 160 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 PYROXD1Q8WU10 500 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 SEC16BQ96JE7 1060 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 XPO6Q96QU8 1125 aaKnown RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 FRMD8Q9BZ67 464 aaPredicted RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 RAD54BQ9Y620 910 aa16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.72■□□□□ 0.27
SNRNP35-204ENST00000527158 TBC1D4O60343 1298 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 ATP5DP30049 168 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 CCR1P32246 355 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 MMP13P45452 471 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 AP1B1Q10567 949 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 AUHQ13825 339 aaKnown RBP16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 FNBP1LQ5T0N5 605 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 TAOK1Q7L7X3 1001 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 TMEM173Q86WV6 379 aaPredicted RBP16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 VPS52Q8N1B4 723 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 ANKS4BQ8N8V4 417 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 ANKLE1Q8NAG6 615 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 CCNYQ8ND76 341 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 C2orf15Q8WU43 125 aaKnown RBP16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 LGMNQ99538 433 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 OSBPL2Q9H1P3 480 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 CCDC134Q9H6E4 229 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 VPS37BQ9H9H4 285 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 ARHGEF38Q9NXL2 777 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 MTMR11A4FU01 709 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 NCAM2O15394 837 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 RTN3O95197 1032 aaPredicted RBP16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 AMHP03971 560 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 GJA8P48165 433 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 GAD2Q05329 585 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 EIF4EBP2Q13542 120 aaPredicted RBP16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 FASTKD3Q14CZ7 662 aaKnown RBP16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 MGAT5BQ3V5L5 792 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 ARHGEF18Q6ZSZ5 1173 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 DENND5BQ6ZUT9 1274 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 TAS1R1Q7RTX1 841 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 HAPLN3Q96S86 360 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 KDM4CQ9H3R0 1056 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 NMUR1Q9HB89 426 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 SFMBT1Q9UHJ3 866 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 SLC27A5Q9Y2P5 690 aa16.71■□□□□ 0.27
SNRNP35-204ENST00000527158 PATJQ8NI35 1801 aa16.71■□□□□ 0.26
SNRNP35-204ENST00000527158 COL4A4P53420 1690 aaPredicted RBP16.7■□□□□ 0.26
SNRNP35-204ENST00000527158 E7ESA3 106 aa16.7■□□□□ 0.26
SNRNP35-204ENST00000527158 YWHAQP27348 245 aa16.7■□□□□ 0.26
SNRNP35-204ENST00000527158 EPHB2P29323 1055 aa16.7■□□□□ 0.26
SNRNP35-204ENST00000527158 PHBP35232 272 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms