RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 NUGGCQ68CJ6 796 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 RFWD3Q6PCD5 774 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 TXNDC11Q6PKC3 985 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 C12orf40Q86WS4 652 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 ETFBKMTQ8IXQ9 262 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 PYROXD2Q8N2H3 581 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 PHTF2Q8N3S3 785 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 TTC16Q8NEE8 873 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 CTNNBL1Q8WYA6 563 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-205ENST00000527046 NTAN1Q96AB6 310 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 OTUB2Q96DC9 234 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 LMLNQ96KR4 655 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 BTN2A3PQ96KV6 586 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 C1orf74Q96LT6 269 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 DCLK3Q9C098 648 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 BRD9Q9H8M2 597 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 FAM204AQ9H8W3 233 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 SPHK2Q9NRA0 654 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 HEBP1Q9NRV9 189 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 THG1LQ9NWX6 298 aaKnown RBP11.17□□□□□ -0.62
NEDD8-205ENST00000527046 MARK1Q9P0L2 795 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 CTTNBP2NLQ9P2B4 639 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 WNT16Q9UBV4 365 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 ZNF212Q9UDV6 495 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 ANAPC7Q9UJX3 599 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 FZD10Q9ULW2 581 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 TECTAO75443 2155 aa11.17□□□□□ -0.62
NEDD8-205ENST00000527046 DOCK4Q8N1I0 1966 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 IGLV3-10A0A075B6K4 115 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 DRGXA6NNA5 263 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 SLC9A3R1O14745 358 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-205ENST00000527046 PROSCO94903 275 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 TACR2P21452 398 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 PCK1P35558 622 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 GGCXP38435 758 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 HARS2P49590 506 aaKnown RBP11.16□□□□□ -0.62
NEDD8-205ENST00000527046 ARSEP51690 589 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
NEDD8-205ENST00000527046 SCAPQ12770 1279 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 AUHQ13825 339 aaKnown RBP11.16□□□□□ -0.62
NEDD8-205ENST00000527046 PIGHQ14442 188 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-205ENST00000527046 ACAP1Q15027 740 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 SPA17Q15506 151 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 FBXL22Q6P050 247 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 CC2D1AQ6P1N0 951 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-205ENST00000527046 ZNF662Q6ZS27 426 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 SFTPA1Q8IWL2 248 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 LRRC57Q8N9N7 239 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 TPCN2Q8NHX9 752 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 FAM71BQ8TC56 605 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 EDAQ92838 391 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 DNASE1L2Q92874 299 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 HAPLN3Q96S86 360 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 OSBPL2Q9H1P3 480 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 GOLPH3Q9H4A6 298 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 EPHX3Q9H6B9 360 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 GPATCH2LQ9NWQ4 482 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 PLK2Q9NYY3 685 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 IP6K2Q9UHH9 426 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 HCN2Q9UL51 889 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 ZNF510Q9Y2H8 683 aa11.16□□□□□ -0.62
NEDD8-205ENST00000527046 MIA3Q5JRA6 1907 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 A0A0A0MRY4 1105 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 MYO1FO00160 1098 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 HOXC11O43248 304 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 BUB1BO60566 1050 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 TSPAN3O60637 253 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 MOCS2O96007 188 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 SLC2A3P11169 496 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 IL4RP24394 825 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 HOXD9P28356 352 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 CHKAP35790 457 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 IFNAR2P48551 515 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 GALK1P51570 392 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 STARD6P59095 220 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 RPS24P62847 133 aaKnown RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 KRT83P78385 493 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 NRG1Q02297 640 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 CCDC173Q0VFZ6 552 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 ITPRIPL2Q3MIP1 535 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 RAP1GAP2Q684P5 730 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 TPGS1Q6ZTW0 290 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 ANKS1BQ7Z6G8 1248 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 SLFN11Q7Z7L1 901 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 REXO1L1PQ8IX06 675 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 YAF2Q8IY57 180 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 ATP6V0D2Q8N8Y2 350 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 OR52K2Q8NGK3 314 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 WFDC5Q8TCV5 224 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 CD101Q93033 1021 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 PCSK1NQ9UHG2 260 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 LSM7Q9UK45 103 aaKnown RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 PYCARDQ9ULZ3 195 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 MTF2Q9Y483 593 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-205ENST00000527046 HYOU1Q9Y4L1 999 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 PAXBP1Q9Y5B6 917 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
NEDD8-205ENST00000527046 NCOR1O75376 2440 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms