RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PSMC3P17980 439 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 TACR2P21452 398 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 ADRA1BP35368 520 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 PCK1P35558 622 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 DEKP35659 375 aaKnown RBP14.21□□□□□ -0.13
CD44-224ENST00000526669 SLC11A2P49281 568 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 SLC25A11Q02978 314 aaKnown RBP14.21□□□□□ -0.13
CD44-224ENST00000526669 ACAP1Q15027 740 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 ARL13BQ3SXY8 428 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 ATP13A4Q4VNC1 1196 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 FAM133BQ5BKY9 247 aaKnown RBP14.21□□□□□ -0.13
CD44-224ENST00000526669 MS4A13Q5J8X5 152 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 KCNT1Q5JUK3 1230 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 ZFYVE27Q5T4F4 411 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 ZNF662Q6ZS27 426 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 TPGS1Q6ZTW0 290 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 SLFN11Q7Z7L1 901 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 C14orf80Q86SX3 495 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 LRRC57Q8N9N7 239 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 DEPDC1BQ8WUY9 529 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 BHMTQ93088 406 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 E2F7Q96AV8 911 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 MYEOVQ96EZ4 313 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 BTN2A3PQ96KV6 586 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 KCTD15Q96SI1 283 aaPredicted RBP14.21□□□□□ -0.13
CD44-224ENST00000526669 EBF3Q9H4W6 596 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 DHX35Q9H5Z1 703 aaKnown RBP14.21□□□□□ -0.13
CD44-224ENST00000526669 PRKAG3Q9UGI9 489 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 LCMT1Q9UIC8 334 aa14.21□□□□□ -0.13
CD44-224ENST00000526669 PACSIN2Q9UNF0 486 aaPredicted RBP14.21□□□□□ -0.13
CD44-224ENST00000526669 NARSO43776 548 aaKnown RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 RARAP10276 462 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 MARCKSL1P49006 195 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 DNA2P51530 1060 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 SGSHP51688 502 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 TNK2Q07912 1038 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 HADHQ16836 314 aaKnown RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 EML3Q32P44 896 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 EFHC2Q5JST6 749 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 ERMARDQ5T6L9 678 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 CIR1Q86X95 450 aaPredicted RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 LGI2Q8N0V4 545 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 RNF10Q8N5U6 811 aaKnown RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 KIAA1524Q8TCG1 905 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 NTAN1Q96AB6 310 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 NECAB3Q96P71 396 aaPredicted RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 TRMT61BQ9BVS5 477 aaKnown RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 BRD9Q9H8M2 597 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 HPS4Q9NQG7 708 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 THG1LQ9NWX6 298 aaKnown RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
CD44-224ENST00000526669 AMFRQ9UKV5 643 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 ZNF510Q9Y2H8 683 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 ZKSCAN5Q9Y2L8 839 aa14.2□□□□□ -0.14
CD44-224ENST00000526669 FAM72CH0Y354 149 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 SRGAP2O75044 1071 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 SLC1A1P43005 524 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 IRAK1P51617 712 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 FCHO2Q0JRZ9 810 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 AUHQ13825 339 aaKnown RBP14.19□□□□□ -0.14
CD44-224ENST00000526669 HS1BP3Q53T59 392 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 LY6G5CQ5SRR4 150 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 ADGRF1Q5T601 910 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 FAM72AQ5TYM5 149 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 FAM72DQ6L9T8 149 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 PEX26Q7Z412 305 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 FAM72BQ86X60 149 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 SLC44A3Q8N4M1 653 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 KRT35Q92764 455 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 P2RY11Q96G91 374 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 PRICKLE1Q96MT3 831 aaPredicted RBP14.19□□□□□ -0.14
CD44-224ENST00000526669 ALS2CR12Q96Q35 445 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 NCAPGQ9BPX3 1015 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.19□□□□□ -0.14
CD44-224ENST00000526669 PLK2Q9NYY3 685 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 STIM2Q9P246 746 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 IGSF9Q9P2J2 1179 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 TBC1D14Q9P2M4 693 aa14.19□□□□□ -0.14
CD44-224ENST00000526669 ANKRD36A6QL64 1941 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 F5H5T6 163 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 PI4K2BG5E9Z4 385 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 SLC9A3R1O14745 358 aaPredicted RBP14.18□□□□□ -0.14
CD44-224ENST00000526669 CHADO15335 359 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 CREB3O43889 395 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 TBL1XO60907 577 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 LATS1O95835 1130 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 KRT1P04264 644 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 CYP17A1P05093 508 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 SCAPQ12770 1279 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 KRT81Q14533 505 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 ANO4Q32M45 955 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 PPP6R3Q5H9R7 873 aaPredicted RBP14.18□□□□□ -0.14
CD44-224ENST00000526669 ZNF569Q5MCW4 686 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 NT5DC3Q86UY8 548 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 TMEM25Q86YD3 366 aa14.18□□□□□ -0.14
CD44-224ENST00000526669 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.18□□□□□ -0.14
CD44-224ENST00000526669 SYCE1Q8N0S2 351 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms