RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 BCAT1P54687 386 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 C21orf59P57076 290 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 RPS14P62263 151 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 CXADRP78310 365 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 ASIC1P78348 528 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 CCDC173Q0VFZ6 552 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 FAM26FQ5R3K3 315 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 SPOPLQ6IQ16 392 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 FBXL19Q6PCT2 694 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 TADA2BQ86TJ2 420 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 TWNKQ96RR1 684 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 ELF4Q99607 663 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 ACE2Q9BYF1 805 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 MAGEF1Q9HAY2 307 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 KBTBD4Q9NVX7 518 aa13.07□□□□□ -0.32
CCDC90B-205ENST00000525916 FAM47DPA6NHR8 397 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 VILLO15195 856 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 DFNA5O60443 496 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 EXOC3O60645 756 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 C4BPAP04003 597 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 DNTTP04053 509 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 WNT1P04628 370 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 ITGAVP06756 1048 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 ABCB4P21439 1286 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 HLA-FP30511 346 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 PSEN1P49768 467 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 NDUFA8P51970 172 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 KIF11P52732 1056 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 COG7P83436 770 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 TLE3Q04726 772 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 SHBQ15464 509 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 KIAA0895LQ68EN5 471 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 UNC93AQ86WB7 457 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 SPACA3Q8IXA5 215 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 CPXM2Q8N436 756 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 EID2Q8N6I1 236 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 PARD3BQ8TEW8 1205 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 DHX58Q96C10 678 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 CYFIP2Q96F07 1278 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 HNRNPABQ99729 332 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 SLC2A11Q9BYW1 496 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 TNMDQ9H2S6 317 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 GOLPH3LQ9H4A5 285 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 PNPLA8Q9NP80 782 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 PRSS16Q9NQE7 514 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 USP25Q9UHP3 1055 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 UBE4BO95155 1302 aa13.06□□□□□ -0.32
CCDC90B-205ENST00000525916 A0A1W2PPC4 97 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 PYCARD-AS1I3L0S3 204 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 TIMM44O43615 452 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 ACTN4O43707 911 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 KIF20AO95235 890 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 C1SP09871 688 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 SLFN14P0C7P3 912 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 C7P10643 843 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 CDK4P11802 303 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 P4HA1P13674 534 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 HOXD9P28356 352 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 SYKP43405 635 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 ASPAP45381 313 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 RACK1P63244 317 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 TAF1BQ53T94 588 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 CNNM4Q6P4Q7 775 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 CHST9Q7L1S5 443 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 ERICH1Q86X53 443 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 ZNF276Q8N554 614 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 SAP25Q8TEE9 199 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 FGF11Q92914 225 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 TMEM176AQ96HP8 235 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 EBF2Q9HAK2 575 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 SGK2Q9HBY8 427 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 CLIC5Q9NZA1 410 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 MARCH2Q9P0N8 246 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 USP3Q9Y6I4 520 aa13.05□□□□□ -0.32
CCDC90B-205ENST00000525916 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 GOLGA6L4A6NEF3 574 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 AP3M2P53677 418 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 SNRPFP62306 86 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 DLG4P78352 724 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 CLDN10P78369 228 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 ZBTB16Q05516 673 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 ZNF776Q68DI1 518 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 ADIPOR2Q86V24 386 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 FAM217AQ8IXS0 508 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 ZC3H3Q8IXZ2 948 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 FMR1NBQ8N0W7 255 aaPredicted RBP13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 TSC1Q92574 1164 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 NAF1Q96HR8 494 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 CDK5RAP1Q96SZ6 601 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 ARID3AQ99856 593 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 LRRC27Q9C0I9 530 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 MTG2Q9H4K7 406 aa13.04□□□□□ -0.32
CCDC90B-205ENST00000525916 FBRSQ9HAH7 460 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms