RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 NDUFV2P19404 249 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 HOXD9P28356 352 aaPredicted RBP13.06□□□□□ -0.32
SMCO4-202ENST00000525141 SLC6A4P31645 630 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 IL12RB1P42701 662 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
SMCO4-202ENST00000525141 BPIFB4P59827 614 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 NR1I3Q14994 352 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 SYCP1Q15431 976 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 MEA1Q16626 185 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 AASDHQ4L235 1098 aaPredicted RBP13.06□□□□□ -0.32
SMCO4-202ENST00000525141 ADGRF1Q5T601 910 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 SYPL2Q5VXT5 272 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 RNF43Q68DV7 783 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 NADSYN1Q6IA69 706 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 TRMT11Q7Z4G4 463 aaKnown RBP13.06□□□□□ -0.32
SMCO4-202ENST00000525141 TMEM110Q86TL2 294 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 FAM71AQ8IYT1 594 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 SIX6OS1Q8N1H7 587 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 DDI1Q8WTU0 396 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 TMA16Q96EY4 203 aaKnown RBP13.06□□□□□ -0.32
SMCO4-202ENST00000525141 LMLNQ96KR4 655 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 MRGPRX1Q96LB2 322 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 GANQ9H2C0 597 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 ELOVL2Q9NXB9 296 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 CALCOCO1Q9P1Z2 691 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 BCCIPQ9P287 314 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMCO4-202ENST00000525141 TJP2Q9UDY2 1190 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
SMCO4-202ENST00000525141 TNRC6BQ9UPQ9 1833 aaKnown RBP13.06□□□□□ -0.32
SMCO4-202ENST00000525141 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 PAPSS1O43252 624 aaPredicted RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 MAP3K13O43283 966 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 MED7O43513 233 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 SERPINC1P01008 464 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 LTFP02788 710 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 HLA-FP30511 346 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 USP8P40818 1118 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 PTK2Q05397 1052 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 EIF4EBP2Q13542 120 aaPredicted RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 DRAP1Q14919 205 aaPredicted RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 TAF5Q15542 800 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 MPPE1Q53F39 396 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 FAM133BQ5BKY9 247 aaKnown RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 PIK3R6Q5UE93 754 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 ADIPOR2Q86V24 386 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 C11orf74Q86VG3 221 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 C12orf50Q8NA57 414 aaPredicted RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 PIGKQ92643 395 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 AZIN2Q96A70 460 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 NAP1L5Q96NT1 182 aaPredicted RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 SLC2A11Q9BYW1 496 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 FAM207AQ9NSI2 230 aaPredicted RBP13.05□□□□□ -0.32
SMCO4-202ENST00000525141 PILRBQ9UKJ0 227 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 FHOD1Q9Y613 1164 aa13.05□□□□□ -0.32
SMCO4-202ENST00000525141 ASCC3Q8N3C0 2202 aaKnown RBP13.04□□□□□ -0.32
SMCO4-202ENST00000525141 A0A1W2PQC6 194 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 LNP1A1A4G5 178 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 TEX33O43247 280 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 ITPKAP23677 461 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 GNA15P30679 374 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 CLCN1P35523 988 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 HARS2P49590 506 aaKnown RBP13.04□□□□□ -0.32
SMCO4-202ENST00000525141 KLK7P49862 253 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 POLR2FP61218 127 aaKnown RBP13.04□□□□□ -0.32
SMCO4-202ENST00000525141 PITX1P78337 314 aaPredicted RBP13.04□□□□□ -0.32
SMCO4-202ENST00000525141 FANCCQ00597 558 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 RAPGEF1Q13905 1077 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 ZNF234Q14588 700 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 FUT11Q495W5 492 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 PPM1JQ5JR12 505 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 SPDYCQ5MJ68 293 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 SDE2Q6IQ49 451 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 ARMCX6Q7L4S7 300 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 SLC41A1Q8IVJ1 513 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
SMCO4-202ENST00000525141 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
SMCO4-202ENST00000525141 MKRN2Q9H000 416 aaKnown RBP13.04□□□□□ -0.32
SMCO4-202ENST00000525141 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 PCNX2A6NKB5 2137 aa13.04□□□□□ -0.32
SMCO4-202ENST00000525141 F8VZ95 297 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 KHNYNO15037 678 aaKnown RBP13.03□□□□□ -0.32
SMCO4-202ENST00000525141 THAP12O43422 761 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 TIMM44O43615 452 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 ACSL4O60488 711 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 FBXO21O94952 628 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 LATS1O95835 1130 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 CYBBP04839 570 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 ADRB1P08588 477 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 NCAM1P13591 858 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 PRKCHP24723 683 aa13.03□□□□□ -0.32
SMCO4-202ENST00000525141 COPAP53621 1224 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms