RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CT47A1Q5JQC4 288 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-203ENST00000525013 PIK3R6Q5UE93 754 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 TMEM215Q68D42 235 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 RNF43Q68DV7 783 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 SERPINA13PQ6UXR4 307 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 SLC36A4Q6YBV0 504 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 CHST9Q7L1S5 443 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 TAC4Q86UU9 113 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 AZIN2Q96A70 460 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 PPP1R13BQ96KQ4 1090 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 FCRL2Q96LA5 508 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-203ENST00000525013 POPDC2Q9HBU9 364 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 TJP2Q9UDY2 1190 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 NFE2L3Q9Y4A8 694 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 TYW5A2RUC4 315 aaKnown RBP19.27■□□□□ 0.68
CAPN1-203ENST00000525013 PATE3B3GLJ2 98 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 GOLGA6L22H0YM25 854 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 IRAK2O43187 625 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 AP5Z1O43299 807 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 CLCN1P35523 988 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 LIMK1P53667 647 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 NNTQ13423 1086 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 TAF5Q15542 800 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 TCP11X2Q5H9J9 407 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 SPDYCQ5MJ68 293 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 LYSMD4Q5XG99 296 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 NADSYN1Q6IA69 706 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 BEND5Q7L4P6 421 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 SLC47A2Q86VL8 602 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 WDTC1Q8N5D0 677 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 HJURPQ8NCD3 748 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-203ENST00000525013 GPT2Q8TD30 523 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 WFIKKN2Q8TEU8 576 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 CPXM1Q96SM3 734 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 EDEM2Q9BV94 578 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 PRDM16Q9HAZ2 1276 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 TAB2Q9NYJ8 693 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 GGA2Q9UJY4 613 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 PCDHGC3Q9UN70 934 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 PLA2G4CQ9UP65 541 aa19.27■□□□□ 0.68
CAPN1-203ENST00000525013 IGHV1OR15-9A0A0B4J2B8 117 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 TRUB2O95900 331 aaKnown RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 APOEP02649 317 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 EPHX1P07099 455 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 PABPC1P11940 636 aaKnown RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 PRKCHP24723 683 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 EEF1GP26641 437 aaKnown RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 BPIFB4P59827 614 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 DRAP1Q14919 205 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 FNDC3BQ53EP0 1204 aaKnown RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 DCAF6Q58WW2 860 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 ZC3H12AQ5D1E8 599 aaKnown RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 MPP7Q5T2T1 576 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 SYT12Q8IV01 421 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 FAM71AQ8IYT1 594 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 C1orf131Q8NDD1 294 aaKnown RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 CYB5D2Q8WUJ1 264 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 SLC39A13Q96H72 371 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 LSM14BQ9BX40 385 aaKnown RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 IRX2Q9BZI1 471 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-203ENST00000525013 LHX5Q9H2C1 402 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 PDCL3Q9H2J4 239 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 SYNCQ9H7C4 482 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 FAM204AQ9H8W3 233 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 CEP83Q9Y592 693 aa19.26■□□□□ 0.67
CAPN1-203ENST00000525013 SYNJ2BP-COX16A0A087WUM0 186 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 LNP1A1A4G5 178 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 NDUFS2O75306 463 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 GRAP2O75791 330 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 HLA-EP13747 358 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 ITPKAP23677 461 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 SNX16P57768 344 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 RPS24P62847 133 aaKnown RBP19.25■□□□□ 0.67
CAPN1-203ENST00000525013 CDK17Q00537 523 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 KCNMA1Q12791 1236 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 ENPP2Q13822 863 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 PPM1JQ5JR12 505 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 EFHC1Q5JVL4 640 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 KLHDC7AQ5VTJ3 777 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 OR6B2Q6IFH4 312 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 ADIPOR2Q86V24 386 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 TMPRSS6Q8IU80 811 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 MFN1Q8IWA4 741 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 CCDC117Q8IWD4 279 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-203ENST00000525013 AHI1Q8N157 1196 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 ENOX1Q8TC92 643 aaKnown RBP19.25■□□□□ 0.67
CAPN1-203ENST00000525013 WFDC5Q8TCV5 224 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 MKRN2Q9H000 416 aaKnown RBP19.25■□□□□ 0.67
CAPN1-203ENST00000525013 NUCKS1Q9H1E3 243 aaKnown RBP19.25■□□□□ 0.67
CAPN1-203ENST00000525013 CD93Q9NPY3 652 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 PLCB1Q9NQ66 1216 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 COX16Q9P0S2 106 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 FHOD1Q9Y613 1164 aa19.25■□□□□ 0.67
CAPN1-203ENST00000525013 ATXN2Q99700 1313 aaKnown RBP19.25■□□□□ 0.67
CAPN1-203ENST00000525013 ADAMTS9Q9P2N4 1935 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 ATP5BP06576 529 aaKnown RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 GLI1P08151 1106 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 POLR2EP19388 210 aaKnown RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 CD70P32970 193 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 PITX1P78337 314 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms