RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 PYROXD1Q8WU10 500 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 HTR3CQ8WXA8 447 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 LRRC39Q96DD0 335 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 SERPINB12Q96P63 405 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 ZBED2Q9BTP6 218 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 UBE2OQ9C0C9 1292 aaKnown RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 NACA2Q9H009 215 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 CDC42EP4Q9H3Q1 356 aaKnown RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 CWH43Q9H720 699 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 XAB2Q9HCS7 855 aaKnown RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 SAYSD1Q9NPB0 183 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 RAB6BQ9NRW1 208 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 MRPL17Q9NRX2 175 aaKnown RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 MTMR10Q9NXD2 777 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 PSD3Q9NYI0 1048 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 BCCIPQ9P287 314 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 SAE1Q9UBE0 346 aaPredicted RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 XPO7Q9UIA9 1087 aaKnown RBP10.3□□□□□ -0.76
VPS13B-212ENST00000524330 TRHDEQ9UKU6 1024 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 PTPRDP23468 1912 aa10.3□□□□□ -0.76
VPS13B-212ENST00000524330 A0A0A0MRY4 1105 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 FAM92AA1XBS5 289 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 SLC38A8A6NNN8 435 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 ZBBXA8MT70 800 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 ALOX15BO15296 676 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 LPXNO60711 386 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 AGTP01019 485 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 GSTA2P09210 222 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 ZSCAN5DPP0CG00 497 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 ERCC2P18074 760 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 TPSB2P20231 275 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 RBL1P28749 1068 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 WDR5P61964 334 aaKnown RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 ZNF844Q08AG5 666 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 AP1B1Q10567 949 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 DPYSQ14117 519 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 TRIP4Q15650 581 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 TPSAB1Q15661 275 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 UAP1Q16222 522 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 KLHL38Q2WGJ6 581 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 RAB6CQ53S08 254 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 OTUD1Q5VV17 481 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 NUGGCQ68CJ6 796 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 TIGD7Q6NT04 549 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 RWDD4Q6NW29 188 aaKnown RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 PSRC1Q6PGN9 363 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 RNF19BQ6ZMZ0 732 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 ITIH5Q86UX2 942 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 FIBCD1Q8N539 461 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 COLGALT1Q8NBJ5 622 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 MCUQ8NE86 351 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 PRCCQ92733 491 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 ZNF689Q96CS4 500 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 PGM2Q96G03 612 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 C1orf74Q96LT6 269 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 SPATA13Q96N96 652 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 DDX50Q9BQ39 737 aaKnown RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 TTLL2Q9BWV7 592 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 RAB6CQ9H0N0 254 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 SEMA4AQ9H3S1 761 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 CNOT10Q9H9A5 744 aaKnown RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 TMEM30AQ9NV96 361 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 DTLQ9NZJ0 730 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 GMIPQ9P107 970 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 RWDD3Q9Y3V2 267 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 HBS1LQ9Y450 684 aaKnown RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
VPS13B-212ENST00000524330 NLRC5Q86WI3 1866 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 SCN5AQ14524 2016 aa10.29□□□□□ -0.76
VPS13B-212ENST00000524330 TLDC2A0PJX2 215 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ERI2A8K979 691 aaKnown RBP10.28□□□□□ -0.76
VPS13B-212ENST00000524330 H0YGN5 161 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 DCLK1O15075 740 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 TCEA3O75764 348 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ACSL3O95573 720 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 SRGAP2BP0DMP2 458 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ETS1P14921 441 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 CSF2RAP15509 400 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 OR1D2P34982 312 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 MAGEA6P43360 314 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 RABGGTBP53611 331 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 EPHB3P54753 998 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 PITX1P78337 314 aaPredicted RBP10.28□□□□□ -0.76
VPS13B-212ENST00000524330 GBE1Q04446 702 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 FPGSQ05932 587 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 RING1Q06587 406 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 TAF10Q12962 218 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 PDIA2Q13087 525 aaKnown RBP10.28□□□□□ -0.76
VPS13B-212ENST00000524330 DUSP4Q13115 394 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 SEMA3BQ13214 749 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 TCTN1Q2MV58 587 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 PARP6Q2NL67 630 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ANO4Q32M45 955 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 C10orf120Q5SQS8 335 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 PRSS55Q6UWB4 352 aaPredicted RBP10.28□□□□□ -0.76
VPS13B-212ENST00000524330 SCD5Q86SK9 330 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 CCNJLQ8IV13 435 aa10.28□□□□□ -0.76
VPS13B-212ENST00000524330 RNF168Q8IYW5 571 aaPredicted RBP10.28□□□□□ -0.76
VPS13B-212ENST00000524330 ZBED8Q8IZ13 594 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms