RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 RAB41Q5JT25 222 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 KRT39Q6A163 491 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 DBX2Q6ZNG2 339 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 ADAT2Q7Z6V5 191 aaKnown RBP27.06■■□□□ 1.92
PVT1-219ENST00000523427 ANKRD52Q8NB46 1076 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 GANCQ8TET4 914 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 TATDN2Q93075 761 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 BIRC7Q96CA5 298 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 UBXN6Q9BZV1 441 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 BTBD1Q9H0C5 482 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 PCED1AQ9H1Q7 454 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 LRRC4Q9HBW1 653 aa27.06■■□□□ 1.92
PVT1-219ENST00000523427 FAM47DPA6NHR8 397 aa27.05■■□□□ 1.92
PVT1-219ENST00000523427 DNTTP04053 509 aa27.05■■□□□ 1.92
PVT1-219ENST00000523427 RPS14P62263 151 aaKnown RBP27.05■■□□□ 1.92
PVT1-219ENST00000523427 FAM217AQ8IXS0 508 aa27.05■■□□□ 1.92
PVT1-219ENST00000523427 IPO9Q96P70 1041 aaKnown RBP27.05■■□□□ 1.92
PVT1-219ENST00000523427 TMEM245Q9H330 911 aa27.05■■□□□ 1.92
PVT1-219ENST00000523427 MTG2Q9H4K7 406 aa27.05■■□□□ 1.92
PVT1-219ENST00000523427 PRSS16Q9NQE7 514 aa27.05■■□□□ 1.92
PVT1-219ENST00000523427 GGA2Q9UJY4 613 aa27.05■■□□□ 1.92
PVT1-219ENST00000523427 H0Y8X5 98 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 MSI1O43347 362 aaKnown RBP27.04■■□□□ 1.92
PVT1-219ENST00000523427 PDE4CQ08493 712 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 ADIGQ0VDE8 80 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 KCNT1Q5JUK3 1230 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 ARHGAP17Q68EM7 881 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 ADIPOR2Q86V24 386 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 GALNT15Q8N3T1 639 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 UBA3Q8TBC4 463 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 WFIKKN2Q8TEU8 576 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 RAB20Q9NX57 234 aa27.04■■□□□ 1.92
PVT1-219ENST00000523427 PABPC1P11940 636 aaKnown RBP27.03■■□□□ 1.92
PVT1-219ENST00000523427 CD19P15391 556 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 GRK6P43250 576 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 MXI1P50539 228 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 SGSHP51688 502 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 PTPRNQ16849 979 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 PRAMEF14Q5SWL7 426 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 BSPRYQ5W0U4 402 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 MBLAC2Q68D91 279 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 ATL3Q6DD88 541 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 PM20D1Q6GTS8 502 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 DHRS13Q6UX07 377 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 TTC39CQ8N584 583 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 ASXL3Q9C0F0 2248 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 OLA1Q9NTK5 396 aaKnown RBP27.03■■□□□ 1.92
PVT1-219ENST00000523427 CELSR3Q9NYQ7 3312 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 USP25Q9UHP3 1055 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 TSPAN16Q9UKR8 245 aa27.03■■□□□ 1.92
PVT1-219ENST00000523427 HBS1LQ9Y450 684 aaKnown RBP27.03■■□□□ 1.92
PVT1-219ENST00000523427 EIF4E1BA6NMX2 242 aaKnown RBP27.02■■□□□ 1.92
PVT1-219ENST00000523427 TNFSF14O43557 240 aa27.02■■□□□ 1.92
PVT1-219ENST00000523427 CMA1P23946 247 aa27.02■■□□□ 1.92
PVT1-219ENST00000523427 CCT8P50990 548 aa27.02■■□□□ 1.92
PVT1-219ENST00000523427 BHLHA9Q7RTU4 235 aa27.02■■□□□ 1.92
PVT1-219ENST00000523427 ZC3H3Q8IXZ2 948 aaKnown RBP27.02■■□□□ 1.92
PVT1-219ENST00000523427 AHI1Q8N157 1196 aa27.02■■□□□ 1.92
PVT1-219ENST00000523427 FBXL13Q8NEE6 735 aa27.02■■□□□ 1.92
PVT1-219ENST00000523427 BBC3Q96PG8 261 aaPredicted RBP27.02■■□□□ 1.92
PVT1-219ENST00000523427 STIM2Q9P246 746 aa27.02■■□□□ 1.92
PVT1-219ENST00000523427 YJEFN3A6XGL0 299 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 E7ENQ6 273 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 RHOBTB3O94955 611 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 MYL1P05976 194 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 LCP1P13796 627 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 POLR2EP19388 210 aaKnown RBP27.01■■□□□ 1.91
PVT1-219ENST00000523427 CD27P26842 260 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 GTF2H1P32780 548 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 CD70P32970 193 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 SYKP43405 635 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 GRIA4P48058 902 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 BCAT1P54687 386 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 NFIL3Q16649 462 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 TTC31Q49AM3 519 aaPredicted RBP27.01■■□□□ 1.91
PVT1-219ENST00000523427 ADGRF1Q5T601 910 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 RFWD3Q6PCD5 774 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 SIX6OS1Q8N1H7 587 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 WFDC5Q8TCV5 224 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 IGSF8Q969P0 613 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 CRELD1Q96HD1 420 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 DCBLD2Q96PD2 775 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 HESX1Q9UBX0 185 aa27.01■■□□□ 1.91
PVT1-219ENST00000523427 GOLGA6L7A0A1B0GV03 622 aa27■■□□□ 1.91
PVT1-219ENST00000523427 PIK3R2O00459 728 aa27■■□□□ 1.91
PVT1-219ENST00000523427 XPO1O14980 1071 aaKnown RBP27■■□□□ 1.91
PVT1-219ENST00000523427 TBL1XO60907 577 aa27■■□□□ 1.91
PVT1-219ENST00000523427 DKK1O94907 266 aa27■■□□□ 1.91
PVT1-219ENST00000523427 ATP5BP06576 529 aaKnown RBP27■■□□□ 1.91
PVT1-219ENST00000523427 DLDP09622 509 aaKnown RBP27■■□□□ 1.91
PVT1-219ENST00000523427 C21orf59P57076 290 aa27■■□□□ 1.91
PVT1-219ENST00000523427 FTSJ1Q9UET6 329 aa27■■□□□ 1.91
PVT1-219ENST00000523427 NCKAP1Q9Y2A7 1128 aa27■■□□□ 1.91
PVT1-219ENST00000523427 NDUFA8P51970 172 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 SGO2Q562F6 1265 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 TCERG1LQ5VWI1 586 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 ZNF776Q68DI1 518 aaPredicted RBP26.99■■□□□ 1.91
PVT1-219ENST00000523427 GATAD2AQ86YP4 633 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 HSCBQ8IWL3 235 aa26.99■■□□□ 1.91
PVT1-219ENST00000523427 GUF1Q8N442 669 aaKnown RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms