RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 HIC1Q14526 733 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 LCLAT1Q6UWP7 414 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 NLRP9Q7RTR0 991 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 POLNQ7Z5Q5 900 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 NDRG1Q92597 394 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 MAGEB18Q96M61 343 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 THTPAQ9BU02 230 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 FZD8Q9H461 694 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 HEY2Q9UBP5 337 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 RUVBL2Q9Y230 463 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 FKTNO75072 461 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SRP72O76094 671 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 LMNAP02545 664 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 PSMB4P28070 264 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CHKAP35790 457 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 ABCG1P45844 678 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 FAAP100Q0VG06 881 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 TUSC3Q13454 348 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SYTL3Q4VX76 610 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 C6orf10Q5SRN2 563 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 LONP2Q86WA8 852 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 MFN1Q8IWA4 741 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CASS4Q9NQ75 786 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 ETNK2Q9NVF9 386 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CFAP99D6REC4 459 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 DDX3YO15523 660 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 DGKIO75912 1065 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 RTN3O95197 1032 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 VAPBO95292 243 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CHRNB2P17787 502 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 TUFMP49411 452 aaKnown RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 AARSP49588 968 aaKnown RBP eCLIP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 PDCD2Q16342 344 aaPredicted RBP13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 SPDYAQ5MJ70 313 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 TCP10LQ8TDR4 215 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 GPR152Q8TDT2 470 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 USP6NLQ92738 828 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 CIPCQ9C0C6 399 aa13.42□□□□□ -0.26
PCDHGB1-201ENST00000523390 HOXD13P35453 343 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 ATXN3P54252 364 aaPredicted RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 DDR2Q16832 855 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 TTMPQ5BVD1 217 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 PRPF39Q86UA1 669 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 LZTR1Q8N653 840 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 ALLCQ8N6M5 410 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 CAPNS2Q96L46 248 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 LGMNQ99538 433 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 DUSP16Q9BY84 665 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 LHX5Q9H2C1 402 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 MINDY3Q9H8M7 445 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 TRMT6Q9UJA5 497 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 DRG1Q9Y295 367 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 ACOT9Q9Y305 439 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 ERCC2P18074 760 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 KLRC2P26717 231 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 MAP4P27816 1152 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 MATKP42679 507 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 MRPS5P82675 430 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 GRIK3Q13003 919 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 KBTBD12Q3ZCT8 623 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 SGO1Q5FBB7 561 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 MON1BQ7L1V2 547 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 UBXN6Q9BZV1 441 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 COQ4Q9Y3A0 265 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 SF3B1O75533 1304 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 EIF4E1BA6NMX2 242 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 ZNF197O14709 1029 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 MAPRE2Q15555 327 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 AGAP9Q5VTM2 703 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 LRRC8EQ6NSJ5 796 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 IFNEQ86WN2 208 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 EIF1ADQ8N9N8 165 aaKnown RBP13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 DCDC2Q9UHG0 476 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 TRHDEQ9UKU6 1024 aa13.41□□□□□ -0.26
PCDHGB1-201ENST00000523390 A0A0A0MRY4 1105 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 HACD1B0YJ81 288 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 OR4Q2P0C623 313 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 CSHL1Q14406 222 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 RAP1GAP2Q684P5 730 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 SLC4A11Q8NBS3 891 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 LPCAT1Q8NF37 534 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 PGM2Q96G03 612 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 SPATA13Q96N96 652 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 ILKAPQ9H0C8 392 aaPredicted RBP13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 DERAQ9Y315 318 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 ANGPT2O15123 496 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 SOX11P35716 441 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 GP5P40197 560 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 CRHR2Q13324 411 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 TBC1D13Q9NVG8 400 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 NDE1Q9NXR1 346 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms