RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 NOX5Q96PH1 765 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 PRDM16Q9HAZ2 1276 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 POPDC2Q9HBU9 364 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 EVLQ9UI08 416 aaPredicted RBP11.33□□□□□ -0.6
PVT1-216ENST00000523068 CLEC4EQ9ULY5 219 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 CYP8B1Q9UNU6 501 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 PLA2G4CQ9UP65 541 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 MUC22E2RYF6 1773 aaPredicted RBP11.33□□□□□ -0.6
PVT1-216ENST00000523068 ADAMTS9Q9P2N4 1935 aa11.33□□□□□ -0.6
PVT1-216ENST00000523068 IGHV1OR15-9A0A0B4J2B8 117 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 BECN2A8MW95 431 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 E5RJQ4 531 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 TM4SF5O14894 197 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 NDUFS2O75306 463 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 APOEP02649 317 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 FYNP06241 537 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 ATP5BP06576 529 aaKnown RBP11.32□□□□□ -0.6
PVT1-216ENST00000523068 HLA-FP30511 346 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 PTGER3P43115 390 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 YWHAZP63104 245 aaKnown RBP11.32□□□□□ -0.6
PVT1-216ENST00000523068 PDCLQ13371 301 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 DPCR1Q3MIW9 517 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 FUT11Q495W5 492 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 VWA3BQ502W6 1294 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 TRIM61Q5EBN2 209 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 PIK3R6Q5UE93 754 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 GJB7Q6PEY0 223 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 SLC23A3Q6PIS1 610 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 KIAA1324Q6UXG2 1013 aaKnown RBP11.32□□□□□ -0.6
PVT1-216ENST00000523068 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 CCDC117Q8IWD4 279 aaPredicted RBP11.32□□□□□ -0.6
PVT1-216ENST00000523068 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.32□□□□□ -0.6
PVT1-216ENST00000523068 HJURPQ8NCD3 748 aaPredicted RBP11.32□□□□□ -0.6
PVT1-216ENST00000523068 CEP76Q8TAP6 659 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 FOXJ1Q92949 421 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
PVT1-216ENST00000523068 LHX5Q9H2C1 402 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 NDST4Q9H3R1 872 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 TMEM9BQ9NQ34 198 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 ABCB8Q9NUT2 735 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 GGA2Q9UJY4 613 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 NAALADL1Q9UQQ1 740 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 CEP83Q9Y592 693 aa11.32□□□□□ -0.6
PVT1-216ENST00000523068 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 PATE3B3GLJ2 98 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 PAPSS1O43252 624 aaPredicted RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 TBL1XO60907 577 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 EPHX1P07099 455 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 GLI1P08151 1106 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 ADRB1P08588 477 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 SLC2A3P11169 496 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 ACADMP11310 421 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 PABPC1P11940 636 aaKnown RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 POLR2EP19388 210 aaKnown RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 ITPKAP23677 461 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 CD6P30203 668 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 OXTRP30559 389 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 SLC6A4P31645 630 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 KRT9P35527 623 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 BPIFB4P59827 614 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 IRX4P78413 519 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 ZNF33AQ06730 810 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 DUOXA1Q1HG43 343 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 FNDC3BQ53EP0 1204 aaKnown RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 FAM133BQ5BKY9 247 aaKnown RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 EFHC1Q5JVL4 640 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 SYCP2LQ5T4T6 812 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 TMEM215Q68D42 235 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 RFWD3Q6PCD5 774 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 RBM43Q6ZSC3 357 aaKnown RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 KIAA0907Q7Z7F0 614 aaPredicted RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 TMPRSS6Q8IU80 811 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 MFN1Q8IWA4 741 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 PRCCQ92733 491 aaPredicted RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 ERLEC1Q96DZ1 483 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 SIPA1Q96FS4 1042 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 SLC39A13Q96H72 371 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 PPP1R13BQ96KQ4 1090 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 FCRL2Q96LA5 508 aaPredicted RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 FBRSQ9HAH7 460 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 ACP6Q9NPH0 428 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 ITM2CQ9NQX7 267 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 TMEM74BQ9NUR3 256 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 SLC12A6Q9UHW9 1150 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 CYTH4Q9UIA0 394 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 DNAJC12Q9UKB3 198 aa11.31□□□□□ -0.6
PVT1-216ENST00000523068 NYNRINQ9P2P1 1898 aaKnown RBP11.31□□□□□ -0.6
PVT1-216ENST00000523068 GOLGA6L7A0A1B0GV03 622 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 KCNJ18B7U540 433 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 TRUB2O95900 331 aaKnown RBP11.3□□□□□ -0.6
PVT1-216ENST00000523068 DLDP09622 509 aaKnown RBP11.3□□□□□ -0.6
PVT1-216ENST00000523068 PRKCHP24723 683 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 SGSHP51688 502 aa11.3□□□□□ -0.6
PVT1-216ENST00000523068 APBA1Q02410 837 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms